FastQCFastQC Report
Thu 7 Sept 2023
SRR14189725_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189725_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31780155
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT1044556532.86820029669459No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC22052276.939006433417333No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC15675224.932392557556752No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA9089152.860008077367779No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCAT8101272.5491600025235877No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA5143651.618510041879909No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCAT4907851.5443127952019113No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC4172371.3128853525100805No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA3428891.0789406156137376No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTTAACTGTAGGCACCA3420291.076234524343887No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA1690740.5320112504171235No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA1578800.4967880112604863No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA1413430.44475239343546313No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAA1298770.4086732742492917No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATC898760.2828054174059252No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA853310.26850403970654013No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCA830830.2614304429918608No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTACTGTAGGCACCATC660080.20770194481430312No Hit
TTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCATC647470.20373405982444076No Hit
ATTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT618990.19477249245637726No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAAT549460.17289405920141043No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA364590.11472253675288871No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGAACTGTAGGCACCA361550.11376596495517408No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)