FastQCFastQC Report
Thu 7 Sept 2023
SRR14189726_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189726_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25240467
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA15729446.231833983103403No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC11948184.733739672883232No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC10304704.082610674358759No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT10022883.9709566387975306No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA9935683.9364089420374038No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA7445472.9498146765668003No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA3995351.5829144524148464No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA3553501.4078582618934903No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA3038121.2036702807440132No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT1825810.7233661722661471No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC1688400.6689258166261345No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAAT1368910.5423473345402048No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAA1128130.44695290305048635No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATC1121870.4444727587647249No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCAT938500.37182354827270037No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTAACTGTAGGCACCATCAAT869590.34452215167017314No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAACTGTAGGCACCATCAA562980.22304658626165672No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA486870.19289262754132083No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATCA428260.16967197952399216No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGAACTGTAGGCACCA405430.1606269804754405No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGAACTGTAGGCACCATCAAT405020.1604645429103986No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA380140.15060735603663752No Hit
GTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAAT363120.14386421614148423No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGGAACTGTAGGCACC333340.13206570227088113No Hit
CCTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCA329570.13057206905086186No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)