FastQCFastQC Report
Thu 7 Sept 2023
SRR14189727_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189727_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24216765
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA255644110.556492578591731No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA13115865.4160248076074575No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC6548232.7040069142183114No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA6380622.634794531804723No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA5275522.1784577750166054No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA4419471.8249629956767555No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA4403021.8181701808643722No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT2740061.1314723498369827No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAAT2394750.9888810499668308No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAA2374460.9805025568031072No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC2355020.9724750601494461No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA1813880.7490182937316359No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTAACTGTAGGCACCATCAAT968570.39995845853069145No Hit
GTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAAT797190.329189303360709No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA793580.32769860053562067No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC688570.28433607874544764No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGAACTGTAGGCACCA675330.2788687919298882No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAACTGTAGGCACCATCAA614570.25377873551649033No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATCA580430.23968106392410382No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATC567230.2342302945913709No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGAACTGTAGGCACCATCAAT521410.21530951801365708No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGCTAACTGTAGGCACCATCAA467090.19287877633531977No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT395890.1634776569042149No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGGAACTGTAGGCACC344920.14243025441259394No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAATA344640.14231463203280867No Hit
TACTGCGATCTGTTGAGACTATCCTTTGATTGAACTGTAGGCACCATCAA333630.1377681948848246No Hit
GTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAATA326600.13486524727807367No Hit
ATTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA321530.13277165632981944No Hit
TACTGCGATCTGTTGAGACTATCCTTTGATTAACTGTAGGCACCATCAAT306220.1264495897779906No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAATC297540.12286529600464803No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAATT278970.11519705460246239No Hit
GTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAATT262840.10853637965269101No Hit
GTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAATC260040.10738015585483858No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)