FastQCFastQC Report
Thu 7 Sept 2023
SRR14189728_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189728_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29484691
Total Bases2.2 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA311056310.549756142942112No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC23026267.809564631353946No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC12040334.0835869706079No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC10467073.550001592351773No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT7163582.429593038638255No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA6497012.20351978591195No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA4418871.4986997828805464No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA3858681.3087062706541506No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA3852401.3065763517752313No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA3624231.2291904297046898No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCAT2668960.9052019571783878No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATC2535200.8598360416936368No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAA1433380.48614380934160034No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAAT1248300.42337225104377046No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATCA975210.33075130412592757No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCAT890250.30193635063023044No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA725680.24612094459460335No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAACTGTAGGCACCATCAA723590.24541210216515413No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT701030.23776067383578822No Hit
ATTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA401630.13621645212425662No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGAACTGTAGGCACCATCAAT388220.13166832916783833No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGAACTGTAGGCACCA330690.11215650860984096No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)