FastQCFastQC Report
Tue 5 Sept 2023
SRR14189730_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189730_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28515308
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA14366295.038097431737367No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC9933363.4835183965047825No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA6885132.414538184192154No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC5840022.048029781056547No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC5370411.8833427995938183No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA2994021.0499693708375866No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA2536530.8895327379946237No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA1970300.6909622017759725No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA1803920.6326145942382948No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAA1260930.4421940664291615No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT954190.3346237747107624No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATC829140.2907701365175505No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAAT767180.2690414566099023No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA647610.22710959320516544No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGTAACTGTAGGCACCATCA603690.2117073397909642No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT447610.15697182720242756No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAACTGTAGGCACCATCAA428570.1502947118789669No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA354570.12434373845795388No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGAACTGTAGGCACCA327130.11472083696237824No Hit
TTGCTTCCCGGTGTCGGGAGGCATCTCTATCTCGTGGAACTGTAGGCACC300900.10552226895111916No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)