FastQCFastQC Report
Thu 7 Sept 2023
SRR14189731_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189731_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33067264
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA3379271.021938192406847No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAAACTGTAGGCACCATCA1292750.3909455587253908No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAA1217980.36833407202966656No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAAACTGTAGGCACCATCA1212970.36681897843135736No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA1078740.3262259617245624No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCC1051970.31813034183898614No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAC975960.2951438619173331No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACA964000.29152699177047126No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAA961880.2908858743196897No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATA945060.28579927265830035No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATA912460.2759405797830749No Hit
CCCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCA848900.256719152815304No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAC839870.25398835537164494No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAT830270.2510851820096153No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAC815990.2467667116335963No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAAACTGTAGGCACCATCAAT808600.24453187297261728No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTA807440.2441810728580387No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACC802240.24260852062027266No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAA752350.22752109155447514No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATC726260.219631113115376No Hit
CGCCTTTTTTCGAAGCATTAAGCGGAGCCAAACTGTAGGCACCATCAATA723890.21891439219162492No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCC723300.21873596799541686No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATT719580.2176109883176304No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATC709110.21444471486966685No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAT698230.21115445172603334No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCA694960.21016555829959202No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACG693110.20960609259961754No Hit
CAACTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAAT687550.20792467136077544No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGC677240.20480678413551237No Hit
ATACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATC677160.20478259102416213No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATAA671860.20317979739720832No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTTGAACTGTAGGCACCATCAAT669950.2026021868637212No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCA649930.19654786074832198No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA645150.19510232234514474No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCT643100.19448237386679468No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTT634880.19199653167555683No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAG630900.19079292438588205No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTC622870.18836454083410106No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAC620590.18767503716061903No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATT620410.18762060266008096No Hit
CGCCTTTTTTCGAAGCATTAAGCGGAGCCAAACTGTAGGCACCATCAATC608110.18390091178998058No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGA607550.18373156001052884No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATCC604290.18274569072300628No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACT593750.1795582483026113No Hit
TCCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAAT593460.17947054827396666No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCG586180.17726897514109421No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATAC578640.17498877439633348No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAA574070.17360674291045064No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATTA562620.1701441038484466No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGA562390.17007454865331464No Hit
CGCCTTTTTTCGAAGCATTAAGCGGAGCCAAACTGTAGGCACCATCAATT559490.16919754836686823No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA546860.16537806091244803No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGC545470.1649577056027375No Hit
TACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATCA534200.16154950104127153No Hit
TTCAATGAGTTGAATACAAATGATTCTTCGAAACTGTAGGCACCATCAAT520590.15743364797281081No Hit
CGCCTTTTTTCGAAGCATTAAGCGGAGCCATAACTGTAGGCACCATCAAT520380.15737014105551642No Hit
CAGAAGGTCGCTGGTTCGATTCCAGCATGAGGAACTGTAGGCACCATCAA508430.15375629504757335No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATCA501910.15178455647252825No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAG500180.15126138043957915No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT494390.14951040400560506No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATAT482800.14600542699873809No Hit
ACTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAA479010.14485927834852014No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA467750.14145409792597294No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAT460600.13929183859904465No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATTT455910.13787351744613646No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGT442850.1339239920182087No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATTC440170.13311352278797545No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCT433140.13098755312807253No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTA431410.13046437709512343No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCG426920.12910653872059086No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT416010.12580720316020097No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATG413200.12495742012402357No Hit
ACTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAC408680.12359050933273463No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGA400400.1210865223079841No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTC385270.11651100012386874No Hit
ACTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCC383680.11603016203578258No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATCG383650.11602108961902624No Hit
ACTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTA382300.11561283086499083No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTG379950.11490215821907733No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGC371430.11232559186027608No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCC364900.11035082914631218No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATAG364480.11022381531172339No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGT364000.11007865664362192No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAG356920.1079375662891251No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGT356050.10767446620319117No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCA355570.10752930753508969No Hit
ACTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAT336220.10167759872724881No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATGA335400.10142961933590877No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)