FastQCFastQC Report
Thu 7 Sept 2023
SRR14189732_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189732_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67468404
Total Bases5 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA4895260.7255633318375221No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA3757540.5569332868760316No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAA3097290.45907266459126556No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCC2739750.40607896994273057No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAC2423970.3592748392269661No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATA2375300.3520610921817567No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACA2369770.3512414492567513No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAA2369140.35114807221466215No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAT2090370.3098294721778212No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA2089140.3096471646194565No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACC2085760.30914618937777155No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAC2054800.3045573747379588No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTA2017520.29903182532671146No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAC2014300.2985545648893666No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAA1840810.27284030610832294No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCC1831050.2713937030435758No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAT1749760.25934510026352486No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATC1746910.2589226803112165No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCA1692560.2508670577119328No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTT1655440.2453652231050256No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACG1655320.2453474370017705No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCA1637440.24269730761676236No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGC1632490.24196363085748998No Hit
TACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATCA1601960.23743854975434134No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCT1599730.23710802466885092No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTC1587860.23534868262186848No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATT1573650.23324251156141176No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAG1523620.22582718867931129No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAC1498530.22210841092372663No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGA1476890.21890098363672572No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACT1476120.2187868561408389No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAAACTGTAGGCACCATCA1465740.2172483582092738No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCG1433520.21247278948528261No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT1431400.21215856832777608No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAA1414580.2096655495215212No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGA1336860.19814608331330916No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGC1329340.19703148750932362No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA1274520.18890620267229088No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAG1200090.17787437212832247No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAT1122640.16639492465243436No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGT1082920.1605077244750002No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCT1082560.16045436616523492No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA1071640.1588358307690219No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTA1063200.15758487484008069No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCG1022990.15162504807435492No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA1018290.150928425696864No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGA983710.1458030636088561No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCC979290.14514794213896035No Hit
ATACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATC963150.14275571125115097No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTG936800.1388501794113879No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTC934400.13849445734628613No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGC919800.1363304814502504No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGT880640.13052628308800665No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCA880090.1304447634480875No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA870680.12905003651783434No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGT866280.1283978793984811No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAG854190.12660592949553096No Hit
TCCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAAT838320.12425371734004556No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAAACTGTAGGCACCATCA802450.11893715464204548No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATG796690.11808342168580126No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCG752220.11149218825451984No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAG737390.1092941223272452No Hit
CAGAAGGTCGCTGGTTCGATTCCAGCATGAGGAACTGTAGGCACCATCAA716540.10620378688667365No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGG706300.10468603940890613No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTT705830.10461637717115704No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATA702430.10411243757892953No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTTGAACTGTAGGCACCATCAAT699630.10369742850297749No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAT676500.10026915710055924No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)