FastQCFastQC Report
Thu 7 Sept 2023
SRR14189735_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189735_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23036017
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA2136670.927534477857001No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA1913630.8307121843155438No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA1744660.757361830389342No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA1395080.6056081656824616No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAA1354830.5881355270748411No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCC1136760.4934707245614552No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAC1057060.4588727296042541No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAA1045840.4540020959352478No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACA1042840.4526997874675991No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATA1036260.4498433908952229No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAT923790.40101984644307215No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAC894640.38836574916575206No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTA878170.3812160756783606No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACC873730.37928865914624044No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAC870890.37805580713019965No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAA818350.35524804483344496No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCC781780.339372904612807No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATC761040.33036961207312876No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAT759420.32966636550059847No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCA748120.32476100360578825No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACG728120.31607894715479673No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGC713420.309697635663318No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTT699080.3034726011879571No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCA690070.2995613347567854No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCT687260.2983415058254211No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAG683050.2965139329424874No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATT681870.2960016916118789No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTC676890.29383985955558206No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC671460.29148268122913784No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGA657690.28550508536263014No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAC655370.28449796681431516No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACT654220.28399874856838314No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAA629020.2730593574401338No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCG618790.2686184855654517No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGC593370.25758359181624146No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGA585450.25414549746164883No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAG537190.23319569524540637No Hit
TACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATCA529860.230013721556118No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAT495740.21520213325072643No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGT477080.2071017745819514No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC472010.20490087327162504No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCT470940.20443638325149696No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTA469700.20389809575153553No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAAACTGTAGGCACCATCA462890.20094185552997293No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCG454760.19741259958264487No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAAACTGTAGGCACCATCA430680.1869594036156511No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGA430500.18688126510759218No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTC415770.1804869305314369No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCC411870.17879392952349357No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTG409460.1777477417211491No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA402680.174804524584263No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGC402100.17455274494718423No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCA401020.17408391389883068No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGT384460.16689517115740973No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTGT381780.16573177559297686No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAG379500.1647420211575638No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC356160.15461006127925675No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATG354540.15390681470672643No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTTGAACTGTAGGCACCATCAAT336350.14601048436454966No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCG335530.145654520050059No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAG334460.14519003002993097No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATA332320.14426104998967484No Hit
TCCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAAT319590.1387349210586188No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGCTAACTGTAGGCACCATCAA318270.13816190533285333No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA313490.13608689384106634No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGG313070.13590457065559552No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTT306150.1329005791235525No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAT303260.1316460219663842No Hit
CAGAAGGTCGCTGGTTCGATTCCAGCATGAGGAACTGTAGGCACCATCAA297810.129280161583489No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCTC282230.12251683960816664No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATAA272460.11827565503185729No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT271210.11773302650367032No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATC270710.11751597509239553No Hit
ATACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATC265740.11535848406432414No Hit
CGGCCTTTTTTCGAAGCATTAAGCGGAGCCAACTGTAGGCACCATCAATT264930.115006860778059No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT264380.11476810422565671No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA259300.11256286188710489No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGG258190.11208100775407484No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGCT251440.10915081370186522No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA241990.10504854202877173No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCTA238920.10371584636354454No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGTG236240.10255245079911167No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATCC236190.10253074565798419No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTTAACTGTAGGCACCATCAATAC230800.10019093144444198No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)