FastQCFastQC Report
Thu 7 Sept 2023
SRR14189736_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14189736_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25762025
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAA3783261.468541389894622No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCA2830811.0988305461236063No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTAACTGTAGGCACCATCAA1868870.7254359857192902No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCAACTGTAGGCACCATCA1221730.4742367884512184No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAAACTGTAGGCACCATCA1132950.43977521177003753No Hit
CCACGCGGCCCGGGTTCGATTCCCGGCATGGGAACTGTAGGCACCATCAA1053650.4089934700397193No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAA828000.321403305834848No Hit
CTCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAA808730.3139233037775563No Hit
TCCAGTTGGTACGTCTGGTTCAGGGTTGTTTAACTGTAGGCACCATCAAT770260.29899047144003627No Hit
TCCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAAT683220.265204307503001No Hit
CCATAAGGCCGGGGTTCGATTCCCCGCAACGGAAACTGTAGGCACCATCA645560.2505858914429281No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAA635540.24669644564043394No Hit
CAGAAGGTCGCTGGTTCGATTCCAGCATGAGGAACTGTAGGCACCATCAA616550.23932513069139555No Hit
TACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATCA550640.21374096174504917No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCC545170.2116176814516716No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTAACTGTAGGCACCAT539660.20947887442854357No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAC488200.18950373660455652No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAA477760.18545126013968233No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATA473110.18364627780618953No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACA470830.18276125421041242No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAT423270.16429997253709674No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACC419510.16284045994055205No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGCTAACTGTAGGCACCATCAA408970.15874916665130168No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAC404880.15716155853431552No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTA401970.15603198894496842No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAC398020.15449872438210893No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCAACTGTAGGCACCATC376860.14628508434410728No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATCAAT376200.14602889330322444No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCAA372450.14457326238911733No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCC364450.14146791643902215No Hit
TGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCAA361670.1403888087213641No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAATA348310.1352028809847052No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTAT344490.13372007829353477No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATC343110.13318440611714336No Hit
CCCATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCA343030.1331533526576424No Hit
CATAAGGCCGGGGTTCGATTCCCCGCAACGGAACTGTAGGCACCATCAAT341310.13248570327837195No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTCA335790.13034301457280628No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTT333950.1296287850042844No Hit
TCCCATGTGGTCTAGTGGTTAGGATTCGTGGAACTGTAGGCACCATCAAT331880.1288252767396973No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACG330100.12813433726580112No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGAACTGTAGGCACCATCAAT327500.1271250998320202No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGC324480.12595283173585928No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCA319220.12391106677367171No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATTTC315810.12258741306244364No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATATT314230.12197410723729986No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCT309760.1202389951876842No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAAG304250.11810018816455616No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAC299300.11617875535793477No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGA293920.1140904102064958No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATACT293830.11405547506455724No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAATC289260.11228154619056538No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATGAA283720.11013109412012448No Hit
CCGTTGTGGTCTAGTGGTTAGGATTTATGGAACTGTAGGCACCATCAATT281270.10918008192290785No Hit
TTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATCA280170.10875309685476978No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCCG279410.10845808898951072No Hit
ATACCCCAACGCAAGGCGGGGTGCAATTATTAGAAACTGTAGGCACCATC272180.10565163258711224No Hit
GTTTGTTGACTCTGAATAAAGCAGTTTACTGTCAAACTGTAGGCACCATC270840.1051314871404713No Hit
TTTGTTGACTCTGAATAAAGCAGTTTACTGTCAGAACTGTAGGCACCATC269920.10477437235621036No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATCGA267610.10387770371312038No Hit
CTGTGGTCGTGACTTCTAATTTGCTGGTAACTGTAGGCACCATCAATAGC264690.10274425244133564No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)