FastQCFastQC Report
Fri 29 Sept 2023
SRR14200572_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14200572_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43452706
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length25-43
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGGG488650.11245559712667838No Hit
TTTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCCGGG475790.10949605762181991No Hit
CTTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCCGGG448460.10320646083583379No Hit
CTTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGGG436880.1005414944698726No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)