FastQCFastQC Report
Thu 7 Sept 2023
SRR14323397_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14323397_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4413947
Total Bases264.8 Mbp
Sequences flagged as poor quality0
Sequence length60
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAGGCACCATCAATATCTCGTATGCCGTCTTCTGCNTGAAAAAAAAA100180.22696239895948003RNA PCR Primer, Index 37 (96% over 27bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)