FastQCFastQC Report
Thu 14 Sept 2023
SRR14340942_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14340942_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10787556
Total Bases285.2 Mbp
Sequences flagged as poor quality0
Sequence length16-147
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCAGTAAAACGCGGCGTGTTCGAATG1845011.7103132535302712No Hit
TGGACGTCATAATTTGTGGTAGAGGG1338921.2411708453703507No Hit
TTTGACTACTGAACCATGCCTGGATCGT1047140.9706925275752913No Hit
TGGACGTCATAATTTGTGGTAGAGG881190.8168578684550978No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAT804420.7456925368452317No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGCT646960.599728057031639No Hit
AAGCGATCTCGTACTAAACGA551790.5115060352873255No Hit
GGACGTCATAATTTGTGGTAGAGGG472810.4382920468732677No Hit
AGCACATGACGAAGTGAGCGGGCTCT400300.3710757098271379No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGC386200.3580050940175884No Hit
GTAGTGGGCCGGCGGGGCTTGGGCGAAAGCTCT311720.28896257873423786No Hit
TTTGACTACTGAACCATGCCTGGATCGG292160.2708305755260969No Hit
GGACGTCATAATTTGTGGTAGAGG291810.2705061276159308No Hit
TTGACTACTGAACCATGCCTGGATCGT249550.2313313599484443No Hit
CCCAGTAAAACGCGGCGTGTTCGAAT235420.21823293431802349No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGCG191250.177287608055059No Hit
TGGACGTCATAATTTGTGGTAGAG171380.15886823669791378No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA158940.14733643097658078No Hit
CCCAGTAAAACGCGGCGTGTTCGAATG148820.13795525140263468No Hit
TGACCCGAAACCGATCGATCTAGCCATGAG132630.12294721807237896No Hit
TTTGACTACTGAACCATGCCTGGATCGC116220.10773524605573312No Hit
TTTGACTACTGAACCATGCCTGGATCG111530.10338764405950708No Hit

[OK]Adapter Content

Adapter graph