FastQCFastQC Report
Thu 14 Sept 2023
SRR14340943_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14340943_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11623766
Total Bases307.9 Mbp
Sequences flagged as poor quality0
Sequence length16-147
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGACTACTGAACCATGCCTGGATCGT2119311.8232559051859787No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATG1558301.3406154253277296No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGCT1150450.9897394699790069No Hit
TGGACGTCATAATTTGTGGTAGAGGG1128540.9708901572863735No Hit
AAGCGATCTCGTACTAAACGA869930.7484063254542461No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAT855140.7356823941569368No Hit
TGGACGTCATAATTTGTGGTAGAGG722280.6213820890750897No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGC506770.4359774620376907No Hit
GGACGTCATAATTTGTGGTAGAGGG460330.3960248339479649No Hit
TTGACTACTGAACCATGCCTGGATCGT457160.39329766273684447No Hit
AGCACATGACGAAGTGAGCGGGCTCT387390.3332740869009235No Hit
GTAGTGGGCCGGCGGGGCTTGGGCGAAAGCTCT282100.2426924285984422No Hit
GGACGTCATAATTTGTGGTAGAGG271840.23386568518327022No Hit
CCCAGTAAAACGCGGCGTGTTCGAAT263560.22674234839207877No Hit
TGACCCGAAACCGATCGATCTAGCCATGAG248840.21407863854107181No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA219760.18906092913432704No Hit
CCCAGTAAAACGCGGCGTGTTCGAATG210080.18073316341708873No Hit
AGGTGTGAAGCGATCTCGTACTAAACGA200570.17255164978372758No Hit
AGACAGACTGATTGGGTGCTAAGATCC150290.12929544521113037No Hit
TTTGACTACTGAACCATGCCTGGATCG117170.10080209804636465No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)