FastQCFastQC Report
Thu 14 Sept 2023
SRR14340953_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14340953_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10440130
Total Bases286.1 Mbp
Sequences flagged as poor quality0
Sequence length16-147
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCAGTAAAACGCGGCGTGTTCGAATG4052163.8813309795950817No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAT3388303.2454576715040906No Hit
TGGACGTCATAATTTGTGGTAGAGGG2046961.9606652407584964No Hit
GTAGTGGGCCGGCGGGGCTTGGGCGAAAGCTCT1305541.250501669998362No Hit
TGGACGTCATAATTTGTGGTAGAGG1141161.0930515233047864No Hit
GGCGCGTCGAGAGAACCATGTCGAAGGAACT667270.639139550944289No Hit
CCCAGTAAAACGCGGCGTGTTCGAAT628440.6019465274857688No Hit
GGCGCGTCGAGAGAACCATGTCGAAGGAAC477640.457503881656646No Hit
AGCACATGACGAAGTGAGCGGGCTCT418000.40037815621069855No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGCT395770.37908531790312955No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA389570.3731466945334972No Hit
TTTGACTACTGAACCATGCCTGGATCGT373350.35761048952455576No Hit
CCCAGTAAAACGCGGCGTGTTCGAATG344340.3298234792095501No Hit
TGGACGTCATAATTTGTGGTAGAG299030.28642363648728514No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGC297740.28518801968941No Hit
TTTGACTACTGAACCATGCCTGGATCG273700.26216148649489995No Hit
GGACGTCATAATTTGTGGTAGAGGG272930.2614239477860908No Hit
GTAGTGGGCCGGCGGGGCTTGGGCGAAAGCTC253240.24256402937511318No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAC227060.21748771327560096No Hit
GAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCT210910.2020185572401876No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATA196040.18777543957785967No Hit
GCGCGTCGAGAGAACCATGTCGAAGGAACT192680.18455708884851052No Hit
GGCGCGTCGAGAGAACCATGTCGAAGGAA183830.1760801829095998No Hit
TGACCCGAAACCGATCGATCTAGCCATGAGC170590.16339834848799775No Hit
GCGCGTCGAGAGAACCATGTCGAAGGAAC170090.16291942724851127No Hit
TGACCCGAAACCGATCGATCTAGCCATGAG167520.16045777207755077No Hit
TCCCAGTAAAACGCGGCGTGTTCGA155470.14891577020592656No Hit
GGCGCGTCGAGAGAACCATGTCGAAGGA149720.14340817595183203No Hit
AGTGGGCCGGCGGGGCTTGGGCGAAAGCTCT149600.14329323485435524No Hit
AAGCGATCTCGTACTAAACGA148000.1417606868879985No Hit
TAGTGGGCCGGCGGGGCTTGGGCGAAAGCTCT144900.13879137520318233No Hit
GGGTGTTTGGTCTAGTGGTATGATTCTCGCT132790.12719190278281975No Hit
TGGACGTCATAATTTGTGGTAGAGGA125820.1205157407043782No Hit
TCATAGTCAAAATCTGAGTTTGATCCTGGCTC120370.11529549919397555No Hit
GGGCGCGTCGAGAGAACCATGTCGAAGGAACT119660.11461543103390476No Hit
AGTAAAACGCGGCGTGTTCGAATG119460.11442386253811015No Hit
GTAGTGGGCCGGCGGGGCTTGGGCGAAAGCTCC117390.11244112860663612No Hit
GGACGTCATAATTTGTGGTAGAGG116990.11205799161504693No Hit
ATTAACAGAACGGGGCTTACGATTGTGTGC114090.10928024842602535No Hit
TCATGCATTGGATGGATGCCCGGGCATTGAGA113000.10823620012394482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)