FastQCFastQC Report
Thu 14 Sept 2023
SRR14340957_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14340957_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12592951
Total Bases329.5 Mbp
Sequences flagged as poor quality0
Sequence length20-147
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTCGTGCTCTCGTTCTAGTGGAACCACC784560.6230152090641821No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATG745750.5921963803400807No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAT721060.5725901736614396No Hit
GAGCTGAGTCGTACTAATGAGCC413760.32856476611399504No Hit
CCCAGTAAAACGCGGCGTGTTCGAAT369950.2937754621613314No Hit
AACTCGTGCTCTCGTTCTAGTGGAACCACT258790.20550385687993228No Hit
AGCACATGACGAAGTGAGCGGGCTCT236650.187922592567858No Hit
GAGCTGAGTCGTACTAATGAGCT202010.16041514018437775No Hit
ACTCGTGCTCTCGTTCTAGTGGAACCACC173370.1376722580751724No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA164820.13088274543433068No Hit
TGGACGTCATAATTTGTGGTAGAGGG164690.13077951307838806No Hit
GTAGTGGGCCGGCGGGGCTTGGGCGAAAGCTCT159090.1263325808223982No Hit
TGGACGTCATAATTTGTGGTAGAGG155220.12325943299549089No Hit
GTCGATGGCCCGAGGTAGAGCACTCAATGGGC149710.11888396929361512No Hit
AAGCGATCTCGTACTAAACGA143630.11405587141568327No Hit
GCGCGTCGAGAGAACCATGTCGAAGGAAC142600.1132379535185994No Hit
CGCGTCGAGAGAACCATGTCGAAGGAACT139050.11041891610632013No Hit
GAGCTAACCGATACTAATGAACCGTG132510.10522553450736051No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)