FastQCFastQC Report
Thu 14 Sept 2023
SRR14510086_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14510086_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13342933
Total Bases342.9 Mbp
Sequences flagged as poor quality0
Sequence length10-89
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGTGACTCTAGATAACCTCG4265773.1970257214062303No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3438532.5770420941182874No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG3328952.494916222692567No Hit
TTGGTGACTCTAGATAACCTC3267522.4488768698756114No Hit
AACTGTGGTAATTCTAGAGCT2786902.088671208946339No Hit
TTGGTGACTCTAGATAACCT2218311.6625355159918735No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1829611.3712202556964048No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1681511.260225169383673No Hit
ACTGTGGTAATTCTAGAGCT1665731.2483986841573738No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT1585301.1881195836027956No Hit
GAGGGCGCACCACCGGCCCGTCTCG1517091.1369988892247305No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA1449211.0861255167810555No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1257150.9421841509659082No Hit
GAGGGCGCACCACCGGCCCGTCTCGC1140000.8543848642573564No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA975020.7307388862703575No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT899060.6738098737361569No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC865580.6487179393016512No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC854740.640593788487134No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT750610.5625524762808897No Hit
TTTGGTGACTCTAGATAACCTCG731260.5480504174007319No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC674650.505623463746689No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC611110.45800274947045No Hit
GGTTGGCCTCGGATAGCCGGTC604440.4530038485541372No Hit
TTGGTGACTCTAGATAACCTCGG553620.41491627065803294No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT536950.4024227656692873No Hit
TTTGGTGACTCTAGATAACCTC527850.39560267596337323No Hit
TAACTGTGGTAATTCTAGAGCT503570.37740577727550606No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGC493450.3698212379542039No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA478810.3588491375921621No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG459390.3442946164834973No Hit
CTGTGGTAATTCTAGAGCT441660.3310066834630737No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG440540.33016728780696114No Hit
ATTGATCATCGACACTTCGAACGCA361010.27056270161890195No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC348100.260887167761391No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAG345010.2585713351030092No Hit
ATTGATCATCGACACTTCGAACG337850.25320519858714724No Hit
CACTCGCCGAATCCCGGGGCCGAGGG336460.25216344862107903No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGC323470.24242795793098862No Hit
AACTGTGGTAATTCTAGAGCTA315080.23613998511421738No Hit
AGGGCGCACCACCGGCCCGTCTCG311360.23335199239927235No Hit
CCTGCGGAAGGATCATTA310180.23246762911872526No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCA303630.22755866345128165No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGG300250.22502548727479935No Hit
AACGATGCCGACCGGCGATGCGGCGGCG295020.22110580934491691No Hit
TTTGGTGACTCTAGATAACCT283640.2125769499104882No Hit
AGGAATAATGGAAT283630.21256945530641574No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG269960.2023243315393999No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGA265390.19889929747829807No Hit
AGCTAGGAATAATGGAAT258230.19353316096243608No Hit
AAAGATTAAGCCATGCATGTCTA256490.19222909985383274No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGAT249510.18699786621127454No Hit
TGGTGACTCTAGATAACCTCG242740.18192401925423743No Hit
CGAGGGCGCACCACCGGCCCGTCTCG239550.1795332405551313No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTCG239030.1791435211433648No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAG237000.17762211651666093No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA235580.17655788273837544No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG233900.1752987892542067No Hit
TAGGAATAATGGAAT232850.17451185582660123No Hit
ATTGATCATCGACACTTCGAACGC228590.1713191544917448No Hit
CCGGGGTCCGGTGCGGAGTGCCCT224990.16862109702566894No Hit
AACTGTGGTAATTCTAGAGC220650.16536843885823305No Hit
AATTAGAGTGTTCAAAGCAGGCCC217940.1633374011546037No Hit
AGGGCGCACCACCGGCCCGTCTCGC217780.16321748748944478No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTC217730.16318001446908262No Hit
TTGGTGACTCTAGATAACCTCGGGCCG217200.16278280045324367No Hit
ACGATGCCGACCGGCGATGCGGCGGCG215750.1616960828627409No Hit
GTTGGCCTCGGATAGCCGGTC212740.1594402070369386No Hit
TTCTAGAGCT206190.15453124136949498No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCC205010.15364687808894792No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC204420.15320469644867438No Hit
CGGTTGGCCTCGGATAGCCGGTC203820.1527550202043284No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCT203570.15256765510251757No Hit
TTGGTGACTCTAGATAACC202900.15206551662966455No Hit
GAGGGCGCACCACCGGCCCGTCTC196370.14717154017036582No Hit
TGGTGACTCTAGATAACCTC195610.14660195026086092No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG189760.14221760687848767No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA183660.13764589839430358No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGG183030.13717373833774027No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCCG181800.13625190203683102No Hit
CCTGCGGAAGGATCATT181750.13621442901646888No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT177480.13301423307754No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT175960.1318750532585302No Hit
TTTGGTGACTCTAGATAACCTCGG173710.13018876734223278No Hit
ACTCGCCGAATCCCGGGGCCGAGGGA172270.1291095443558024No Hit
CTAAACCATTCGTAGACGACCTGCTT167280.12536973692365838No Hit
ATAACCTCGGGCCGATCGCA163080.12222200321323655No Hit
AAATTAGAGTGTTCAAAGCAGGCCC160840.12054321190101158No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC160630.12038582521549047No Hit
ACTGTGGTAATTCTAGAGC157050.11770275695755948No Hit
TTTTGGTGACTCTAGATAACCTCG155350.11642867426524589No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCC152250.11410534700279167No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC149560.1120892985073072No Hit
ATAACCTCGGGCCGATCGCAC148700.11144476255707796No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCG147530.1105678938806033No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG147360.11044048561137194No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG146240.10960108995525947No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC145090.10873921048692968No Hit
TGGTGACTCTAGATAACCT143700.10769746052086149No Hit
TCGGGCCGATCGCA139330.1044223185412083No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGG135290.10139449849594538No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)