FastQCFastQC Report
Thu 14 Sept 2023
SRR14510088_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14510088_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22020416
Total Bases557.1 Mbp
Sequences flagged as poor quality0
Sequence length10-89
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGTGACTCTAGATAACCTCG7075963.2133634532608286No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5028942.2837624865942585No Hit
TTGGTGACTCTAGATAACCTC4644922.1093697775736846No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG3582781.6270264830600838No Hit
AACTGTGGTAATTCTAGAGCT3515671.5965502195780499No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2992201.3588299149298542No Hit
TTGGTGACTCTAGATAACCT2777221.2612023315090868No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA2607891.18430550994132No Hit
GAGGGCGCACCACCGGCCCGTCTCG2533081.1503324914479363No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT2439081.107644832867826No Hit
CAGTGGCTGGTTGAGAT2361961.0726227878710375No Hit
GAGGGCGCACCACCGGCCCGTCTCGC2078530.9439104147714558No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2054690.9330840979570957No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA2033710.9235565758612372No Hit
ACTGTGGTAATTCTAGAGCT1895180.860646774338868No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA1620470.7358943627586327No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1459030.6625805797674303No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1297380.589171430730464No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1271770.5775413143875211No Hit
TTTGGTGACTCTAGATAACCTCG1200310.5450896113860882No Hit
AGCAGTGGCTGGTTGAGATTT1104840.5017343904856294No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT1070090.4859535805318119No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC1036540.47071771941093216No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1003840.4558678637133831No Hit
GGTTGGCCTCGGATAGCCGGTC983640.44669455835893385No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC949680.43127250638680026No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG882060.4005646396507677No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGC814630.36994305647995024No Hit
TAACTGTGGTAATTCTAGAGCT727340.3303025701240158No Hit
TTTGGTGACTCTAGATAACCTC724800.32914909509429796No Hit
TTGGTGACTCTAGATAACCTCGG716990.3256023864399292No Hit
AGAGCAGTGGCTGGTTGAGATTTAA712880.32373593668711803No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG701040.31835910820213387No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAG657630.29864558417061693No Hit
GTTGGCCTCGGATAGCCGGTC641020.29110258407470596No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC627980.28518080675678426No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA611220.277569688056756No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC578140.2625472652287768No Hit
AACGATGCCGACCGGCGATGCGGCGGCG565630.25686617364540254No Hit
AGGGCGCACCACCGGCCCGTCTCG560580.25457284730679025No Hit
ATTGATCATCGACACTTCGAACG558940.25382808390177547No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGA549240.24942308083553008No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGC521990.23704820108757255No Hit
AAAGATTAAGCCATGCATGTCTA494940.22476414614510462No Hit
CTGTGGTAATTCTAGAGCT488720.22193949469437815No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGAT482820.21926016293243505No Hit
ACGATGCCGACCGGCGATGCGGCGGCG482770.21923745673106268No Hit
ATTGATCATCGACACTTCGAACGCA460740.20923310440638362No Hit
AATTAGAGTGTTCAAAGCAGGCCC442980.20116786167890746No Hit
TGGTGACTCTAGATAACCTCG435250.19765748294673452No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG426780.19381105243425012No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCA426750.19379742871342667No Hit
AACTGTGGTAATTCTAGAGCTA425460.1932116087180188No Hit
AGGAATAATGGAAT422030.1916539633038722No Hit
CACTCGCCGAATCCCGGGGCCGAGGG415850.18884747681424366No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC412590.18736703248476322No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGG407330.18497834010038683No Hit
ATTGATCATCGACACTTCGAACGC405250.18403376212329503No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGG404750.18380670010957104No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAG403670.18331624615992723No Hit
AGCTAGGAATAATGGAAT388650.17649530326765853No Hit
AGGGCGCACCACCGGCCCGTCTCGC387830.1761229215651512No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG373680.1696970665767622No Hit
CGAGGGCGCACCACCGGCCCGTCTCG369320.16771708581708902No Hit
TTTGGTGACTCTAGATAACCT367420.16685425016493785No Hit
TAGGAATAATGGAAT361190.16402505747393692No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA360120.16353914476456757No Hit
TTGGTGACTCTAGATAACCTCGGGCCG359910.1634437787188035No Hit
CCTGCGGAAGGATCATT359160.16310318569821752No Hit
CCGGGGTCCGGTGCGGAGTGCCCT358630.16286249996367008No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTCG341720.15518326265952467No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCCG340570.1546610200279595No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT339790.15430680328655008No Hit
CCTGCGGAAGGATCATTA339660.15424776716298183No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGG339590.1542159784810605No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC335510.15236315244907273No Hit
GAGGGCGCACCACCGGCCCGTCTC332050.15079188331410268No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT327370.14866658286564616No Hit
CGGTTGGCCTCGGATAGCCGGTC320240.14542867854994201No Hit
GTTGAACCCCATTCGTGATGGGGATCGGG310870.14117353641275443No Hit
AAATTAGAGTGTTCAAAGCAGGCCC310710.14110087656836273No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG309400.1405059740924059No Hit
TGGTGACTCTAGATAACCTC300300.13637344544262922No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT299990.13623266699412037No Hit
AACTGTGGTAATTCTAGAGC297620.13515639304906865No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTC296240.13452970189119043No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCT278310.1263872580790481No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG275220.12498401483423383No Hit
ATTGATCATCGACACTTCGAAC271890.12347178182283206No Hit
CGGCCGAGGTGGGATCCCG271010.12307215267867783No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC270490.12283600818440486No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCG268960.12214119842240945No Hit
TTTTGGTGACTCTAGATAACCTCG265780.12069708401512488No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG263090.1194754903812898No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC261250.1186399021707855No Hit
TTTGGTGACTCTAGATAACCTCGGGCCG258160.11723665892597124No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA257500.11693693706785557No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGA254460.11555640002441371No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT253680.11520218328300429No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT252280.11456640964457711No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC248460.11283165585972582No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT241500.10967095262868784No Hit
ATAACCTCGGGCCGATCGCAC240120.10904426147080963No Hit
TCGGGCCGATCGCA234790.1066237804045119No Hit
TCGGGCCGATCGCAC232410.10554296521918569No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG229820.10436678398809542No Hit
TTTGGTGACTCTAGATAACCTCGG229410.10418059313684173No Hit
TTGGTGACTCTAGATAACC227600.1033586286471609No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG226390.10280913857394884No Hit
TTGGTGACTCTAGATAACCTCGGGCCGA225380.10235047330622636No Hit
ATAACCTCGGGCCGATCGCA223240.10137864788748768No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)