FastQCFastQC Report
Thu 14 Sept 2023
SRR14510089_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14510089_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16268210
Total Bases414.3 Mbp
Sequences flagged as poor quality0
Sequence length10-89
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5304823.2608504561964713No Hit
TTGGTGACTCTAGATAACCTCG4415642.714275264457491No Hit
TTGGTGACTCTAGATAACCTC3866312.3766044328171323No Hit
AACTGTGGTAATTCTAGAGCT3505732.1549574292439058No Hit
TTGGTGACTCTAGATAACCT2539431.5609768991179729No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG2528011.5539570733350505No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT2396921.4733766038181213No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2155301.3248538099766354No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2015181.2387226375858194No Hit
ACTGTGGTAATTCTAGAGCT1816681.1167055256847558No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA1763191.0838254485281418No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1621970.9970181107817024No Hit
GAGGGCGCACCACCGGCCCGTCTCG1273510.782821220035886No Hit
GAGGGCGCACCACCGGCCCGTCTCGC1223820.7522769868350605No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1142630.7023698366323031No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1017380.6253791904579544No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT960440.5903784128677955No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT916640.5634547377984425No Hit
GGTTGGCCTCGGATAGCCGGTC915030.5624650775961215No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGC804740.49467028025824594No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA798150.4906194350822862No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC765540.47057420576695286No Hit
TTTGGTGACTCTAGATAACCTCG730740.4491827926981518No Hit
TAACTGTGGTAATTCTAGAGCT711730.4374974259614303No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC690340.4243490832734518No Hit
TTTGGTGACTCTAGATAACCTC585850.360119521447043No Hit
TTGGTGACTCTAGATAACCTCGG553630.34031402348506684No Hit
AATTAGAGTGTTCAAAGCAGGCCC481240.29581619612729365No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAG478020.2938368757226517No Hit
CTGTGGTAATTCTAGAGCT471740.28997658623782213No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCA458380.2817642506458916No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGA451180.27733844104545No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGAT441370.2713082754648483No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG440250.2706198161936685No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA428030.2631082337884746No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG421200.25890986162583346No Hit
CCTGCGGAAGGATCATTA412980.25385706233199595No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC400310.24606886682677445No Hit
AAATTAGAGTGTTCAAAGCAGGCCC390930.24030302043064355No Hit
AGGAATAATGGAAT386600.2376413877126002No Hit
CCGGGGTCCGGTGCGGAGTGCCCT378190.2324717962209733No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC377070.2317833369497935No Hit
AAAGATTAAGCCATGCATGTCTA375310.23070147238079666No Hit
AACGATGCCGACCGGCGATGCGGCGGCG369180.22693338726264292No Hit
AACTGTGGTAATTCTAGAGCTA365420.22462213113796786No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG351930.21632988509491824No Hit
ATTGATCATCGACACTTCGAACG351100.21581968759931178No Hit
TAGGAATAATGGAAT340650.2093961167208931No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGC336640.20693118665175825No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC335270.20608905343611866No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC332070.20412202694703352No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGG332040.20410358607369836No Hit
TTGGTGACTCTAGATAACCTCGGGCCG316550.1945819484749705No Hit
TTTGGTGACTCTAGATAACCT316300.19442827453051073No Hit
AACTGTGGTAATTCTAGAGC314810.19351237782153047No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT314620.193395585623741No Hit
CCTGCGGAAGGATCATT306790.1885825176832608No Hit
ACGATGCCGACCGGCGATGCGGCGGCG298680.18359733492498562No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGG294770.1811938744336347No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA292960.1800812750757459No Hit
CACTCGCCGAATCCCGGGGCCGAGGG288000.1770323840176639No Hit
TGGTGACTCTAGATAACCTCG284100.17463507048409138No Hit
CGGTTGGCCTCGGATAGCCGGTC282900.17389743555068443No Hit
ATTGATCATCGACACTTCGAACGCA278470.17117433325485717No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAG274060.16846352487458668No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGG271880.16712348807889743No Hit
AGCTAGGAATAATGGAAT264080.16232886101175237No Hit
GTTGGCCTCGGATAGCCGGTC262480.1613453477672098No Hit
AGGGCGCACCACCGGCCCGTCTCG261240.1605831250026893No Hit
GTTGAACCCCATTCGTGATGGGGATCGGG259130.15928611691144878No Hit
TGGTGACTCTAGATAACCTC254820.1566367781089622No Hit
ATTGATCATCGACACTTCGAACGC247490.1521310580574015No Hit
TTCTAGAGCT244720.15042835075278718No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTCG239400.1471581692146831No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGC237740.14613777422347018No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCCG227650.13993549382507356No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCTC222830.13697266017588905No Hit
TGCATTTATCAGTTGGTGACTCTAGATAACCT219450.13489498844679285No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT218970.13459993447343008No Hit
TTGGTGACTCTAGATAACC218410.1342557048378402No Hit
AGGGCGCACCACCGGCCCGTCTCGC217760.13385615258224476No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA214880.13208582874206812No Hit
TTGGTGACTCTAGATAACCTCGGGCCGA200870.12347394089454217No Hit
CGAGGGCGCACCACCGGCCCGTCTCG200390.12317888692117941No Hit
ATAACCTCGGGCCGATCGCAC196750.12094139428984504No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCG196680.1208983655853963No Hit
CAGTGGCTGGTTGAGAT195480.12016073065198936No Hit
TTTGGTGACTCTAGATAACCTCGGGCCG194860.11977961926972912No Hit
ACTGTGGTAATTCTAGAGC193860.11916492349189No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT190930.11736386486282141No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG188290.11574106800932617No Hit
TCGGGCCGATCGCAC187240.1150956374425951No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGA186810.11483131825812429No Hit
TAGATAACCTCGGGCCGATCGCAC184740.11355889799799732No Hit
AGATTAAGCCATGCATGTCTA183370.11271676478235775No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT180060.11068212175771028No Hit
AAAAAATTAGAGTGTTCAAAGCAGGCCC179830.11054074172880729No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCG179060.11006742597987117No Hit
TGGTGACTCTAGATAACCT178500.10972319634428127No Hit
TCGGATAGCCGGTC177360.1090224431575447No Hit
AAGATTAAGCCATGCATGTCTA177350.1090162961997663No Hit
TCGGGCCGATCGCA176770.1086597726486196No Hit
GTTGAACCCCATTCGTGATGGGGATCGG174010.10696321230178367No Hit
TTTGGTGACTCTAGATAACCTCGG172600.10609649125503053No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTAA170740.10495315710824978No Hit
CCTGCGGAAGGATCAT170450.10477489533267643No Hit
ATAACCTCGGGCCGATCGCA168370.10349632811477108No Hit
CAGCTAGGAATAATGGAAT166610.10241446354577424No Hit
AGATAACCTCGGGCCGATCGCAC164730.10125883548343673No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)