FastQCFastQC Report
Thu 14 Sept 2023
SRR14602120.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14602120.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1410194
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length71-49250
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGTACTTCGTTCAGTTACGTATTGCTCACATCGTATGCGCTGCTAGT48930.34697353697434535No Hit
CATTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATG45700.3240688869758345No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTCACATCGTATGCGCTGCTAGTA27920.19798694364037855No Hit
CATTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATACGATG16940.1201253160912612No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT16480.1168633535527736No Hit
CATTGTACTTCGTTCAGTTACGTATTGCTCATCGTATGCGCTGCTAGTAG14630.10374459116972558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)