FastQCFastQC Report
Thu 14 Sept 2023
SRR14602124.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14602124.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1465523
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length87-42828
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGTACTTCGTTCAGTTACGTATTGCTCACATCGTATGCGCTGCTAGT76120.5194050178673416No Hit
CATTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATG58600.3998572523256203No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTCACATCGTATGCGCTGCTAGTA53650.36608091445852436No Hit
CATTGTACTTCGTTCAGTTACGTATTGCTCATCGTATGCGCTGCTAGTAG27450.1873051463538955No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT24240.16540170300977874No Hit
CATTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATACGATG21980.14998058713510468No Hit
CATTGTGCTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATG18130.12371010212736341No Hit
CATTGTGCTTCGTTCAGTTACGTATTGCTCACATCGTATGCGCTGCTAGT16500.1125877928903197No Hit
CGGTATTGCTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGAT15250.10405841464105306No Hit
CGGTATTGCTTCGTTCAGTTACGTATTGCTCACATCGTATGCGCTGCTAG14740.10057842831535226No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)