FastQCFastQC Report
Thu 14 Sept 2023
SRR14602127.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14602127.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137203
Total Bases159.3 Mbp
Sequences flagged as poor quality0
Sequence length96-32125
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT16571.2076995400975197No Hit
ATTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT5290.38556008250548457No Hit
GGTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT4330.3155907669657369No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATACGATGT3410.24853683957347875No Hit
GTTGTGCTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT3360.24489260438911686No Hit
GGTATTGCTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATG2620.19095792366056136No Hit
GGTATTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATG2290.16690597144377312No Hit
GATGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT2180.158888654038177No Hit
TGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGTGT2170.15815980700130464No Hit
GTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGTG1790.1304636196001545No Hit
TTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATGTG1670.12171745515768605No Hit
GTTATTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGATG1470.10714051442023863No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTCTACTAGCAGCGCATGCGTGTG1440.10495397330962151No Hit
GTTGTACTTCGTTCGGTTACGTATTGCTCTACTAGCAGCGCATGCGATGT1380.10058089108838729No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)