FastQCFastQC Report
Thu 14 Sept 2023
SRR14714415_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14714415_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44870051
Total Bases3.8 Gbp
Sequences flagged as poor quality0
Sequence length85
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAACTGA4738601.056071899717698No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAACTG4263320.9501482403039836No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAACTGA1556600.34691291079655784No Hit
AGCTAGGAATAATGGAAAAAAAAAAAAAAACTGATCAGATCGGAAGAGCG1535120.34212575332263384No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAA1520190.3387983668661308No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAAA1514260.3374767726473054No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1412310.31475560391050145No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAACTGA1410580.31437004606925895No Hit
AGCTAGGAATAATGAAAAAAAAAAAAAAACTGATCAGATCGGAAGAGCGG1360910.30330030157532023No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCAAAAAAAAAAAAAAAC1247190.2779560023232423No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGAAAAAAAAAAAAAAACTG1201990.2678824679740168No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAACTGA1195970.26654081583281464No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAAAAAAAAAA1195550.26644721219505635No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAACTGA1191860.2656248373776085No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAACTG1171680.2611274054491268No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAAC1092400.2434586044932287No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAACTGAT1091640.243289226482047No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTTCAAAAAAAAAAAAAAACTGA981440.21872941486070518No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAACTGA951570.21207241328965726No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAACTGAT889600.19826141940422576No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAACTGAT877250.19550902672252368No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAA876070.19524604507358373No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGAAAAAAAAAAAAA857820.1911787441471818No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAACTGA845720.18848206791652633No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGTAAAAAAAAAAAAA782660.17442815030453165No Hit
AGAGCGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAA780600.17396904674790764No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAAA770960.17182062039555068No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA723560.1612567812771151No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAAAACTGATC717370.15987724194920125No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAACTG655750.146144251095235No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAACT641770.14302858715270905No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCAAAAAAAAAAAAAAAA617750.13767535053615162No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGCAAAAAAAAAAAAA613060.13663010991451738No Hit
AGGAATAATGGAAAAAAAAAAAAAAACTGATCAGATCGGAAGAGCGGTTC605320.1349051285901146No Hit
AGAGCGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAA572050.12749038328483292No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAACTG568570.12671481028626422No Hit
AGGAATAATGAAAAAAAAAAAAAAACTGATCAGATCGGAAGAGCGGTTCA563170.12551133494365763No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAACTG562100.12527286853317818No Hit
GGAGCGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAA533150.11882090350198175No Hit
AGAGGTCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAA492690.10980375306459982No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCAAAAAAAAAAAAAAACTG461350.10281913876139788No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCGAAAAAAAAAAAAAAACTGA459810.10247592542295082No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)