FastQCFastQC Report
Thu 14 Sept 2023
SRR14714421_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14714421_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34432274
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length84
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAAACACTGTAGATCGG6919692.009652339546322No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAACACT5727361.6633696630086063No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAACACT5276151.5323269093409282No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAACACTG4568591.3268336561215794No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAAAACACTGT3598611.0451270223976494No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAACAC3133050.9099166671361875No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAACAC2602830.7559274185608537No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAACACTGTAGATCGGA2503700.7271375686659557No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAACACTG2469650.717248590668162No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAAACACT2308300.6703884849429347No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAACACTG1936830.5625042365775783No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAACACT1747750.5075906401070113No Hit
CCCCCCGAGTGTTACAGCCCCCCCGCCGAGGGCGCACCACCGGCCCGTCT1667060.48415623086642495No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAAAACACTGTAGATCG1663870.4832297744842528No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAACAC1504850.43704635947076864No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTTGAAAAAAAAAAAAAAACACTG1487860.4321120353538078No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAACACT1436160.41709705260825936No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAAACACAGTAGATCGG1361110.39530064148536925No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA1302210.37819459731297445No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAACACTGT1252120.3636471991364846No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAAACACTGTA1228130.35667989863231225No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAACAC1198710.34813558930206No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGGAAAAAAAAAAAAAAACACT1140240.3311544279648797No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAACACT987130.2866874258725985No Hit
CCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAAACACTGTAGATCGGA962330.27948488095790597No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAACACT945220.27451570581716445No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAACACTGT853840.24797665120810786No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCTCAAAAAAAAAAAAAAACACT842170.2445873891454279No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAACACTGTAGATCGGAA793560.2304698202622342No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCTAAAAAAAAAAAAAAACACTG779190.22629641016448698No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGAAAAAAAAAAAAAAACAC752210.2184607383177771No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAACACTG731520.21245184096757597No Hit
CCCCCCGAGTGTTACAGCCCTCAAAAAAAAAAAAAAACACTGTAGATCGG728370.21153700159333072No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAAAAACACTG726850.21109555529210763No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAACACT713430.2071980491326248No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAACA695320.2019384487937102No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCAAAAAAAAAAAAAAACAC692420.2010962157190083No Hit
CCCCCCGAGTGTTACAGCCCCAAAAAAAAAAAAAAACACTGTAGATCGGA686260.19930719649826206No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAACACTGT648610.18837268778704536No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAAAACAC616590.17907327294154315No Hit
CCCCCCGAGTGTTACAAAAAAAAAAAAAAACACTGTAGATCGGAAGAGCA578990.16815328549023512No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTAAAAAAAAAAAAAAACAC574070.16672439351522353No Hit
CCCCCCGAGTGTTAAAAAAAAAAAAAAACACTGTAGATCGGAAGAGCACA573670.1666082234359543No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCCAAAAAAAAAAAAAAACACTG572640.16630908548183604No Hit
CCTCGCCCGTCACGCACCGCACGTTCAAAAAAAAAAAAAAACACTGTAGA568350.16506316138167348No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAACACTG541560.1572826703226165No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAACACTG524990.15247032478888847No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAACACT482680.1401824346541852No Hit
CCCCCCGAGTGTTACAGCCCCTAAAAAAAAAAAAAAACACTGTAGATCGG477970.13881453197078997No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAACA470300.1365869707008024No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAAA469170.13625879022686682No Hit
CCTCGCCCGTCACGCACCGCACGTTCGAAAAAAAAAAAAAAACACTGTAG458900.13327612344162923No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAACACT455430.1322683480039686No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTTGAAAAAAAAAAAAAACACTGT445340.12933795775440216No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCCTAAAAAAAAAAAAAAACAC431860.12542302608302897No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAACAC415940.12079945692811343No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAAAACACAGTAGATCG403940.1173143545500364No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTTGAAAAAAAAAAAAAAAACACT382100.11097146822193621No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAACACA380060.1103790008176631No Hit
CCCCCCGAGTGTTACAGCCCCCAAAAAAAAAAAAAACACAGTAGATCGGA372400.10815434379965727No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAACACTG362390.10524718756594467No Hit
GGAAGATTAGCTCAGTTGGGAGAGCATCGAAAAAAAAAAAAAAACACTGT355480.10324034944656864No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGAAAAAAAAAAAAAAACACTG351750.10215706345738304No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAACACTGTAG348030.10107668172017914No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAACACTGTA345050.10021121462962337No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)