FastQCFastQC Report
Thu 14 Sept 2023
SRR14824510.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14824510.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160456445
Total Bases5.7 Gbp
Sequences flagged as poor quality0
Sequence length10-150
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGACCTCAGATCAGACGTGGCGACCCGCTGA57325133.5726286968404417No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGC37633022.3453729141263224No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGC30247971.8851202891850185No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA28304121.7639752644401412No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA28156821.7547952031468725No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG25100291.5643055035900866No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA22828051.4226944888377653No Hit
CGCCGCGACCGGCTCCGGGA22278871.3884683784437577No Hit
CCCTTGTAAATTTAACTGTTAGTCCAAAG20938211.304915486567087No Hit
CCCTTGTAAATTTAACTGTTAGTCCA12529890.7808904154644583No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC10145100.6322650361598128No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGG10061750.6270704800919651No Hit
CCCTTGTAAATTTAACTGTTAGTCCAA9207860.5738541695847742No Hit
CGCGACCGGCTCCGGGACGGCTGGG8779700.5471702928480062No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG8335580.5194917536656132No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG7734540.4820336135454079No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTG7573800.4720159417716129No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAAT7526720.46908181220143574No Hit
AGCGGAGGAGAAGAAACTAACCAGGATTCCCT7428680.4629717428925962No Hit
ATGGATTTTTGGAGCAGGG6678300.41620640417404237No Hit
TTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGG6523490.40655830309589625No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCC6512640.40588210713505457No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATT6311030.39331732670507563No Hit
CCCTTGTAAATTTAACTGTTAGTCCAAAGAG6263220.3903377019227866No Hit
CGACCTCAGATCAGACGTGGCGACCCGCTGA6208630.38693553256773205No Hit
CGGCTCCGGGA6046780.37684868314264347No Hit
CGCGACCGGCTCCGGGACGGCTGG5998150.373817954149489No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT5186350.32322478539269645No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT4759110.2965982450876311No Hit
ATGGATTTTTGGAGCAGG4385210.2732959713771547No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTG4358280.2716176343056834No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC4328390.2697548234974295No Hit
TGGAGCACGAGCGCACGTGTTAGGACCCGA4266870.2659207612383535No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC4245580.2645939214221031No Hit
CCCTTGTAAATTTAACTGTTAGTCCAAAGA4162110.2593918866892508No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC4126320.2571613748515991No Hit
AGCACGAGCGCACGTGTTAGGACCCGA3780550.23561222486264108No Hit
CCCTTGTAAATTTAACTGTTAGTCCAAA3763830.23457019753865294No Hit
CCCCTTGTAAATTTAACTGTTAGTCCAAAG3745370.23341972957209664No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGC3695960.23034038925641162No Hit
CTAACCAGGATTCCCTCAGTAACG3611100.22505172665392156No Hit
AGACCCTGTTGAGCTTGACTCTAGTCTGGCACG3399610.21187120280522234No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACAC3366150.2097859017130786No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG3128850.1949968416662852No Hit
GGGGGCCCAAGTCCTTCTGATCGAGGC3021630.18831465448458615No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC2908600.18127037527224288No Hit
GATTTATAGGTAGAGGCGAC2868160.17875006516565914No Hit
CTAAACCATTCGTAGACGACCTGCTT2767140.17245427567586954No Hit
AGTGAACAGGGAAGAGCCCAGCGCCGAATCCCC2729630.17011656963981722No Hit
AGGGCTTCTGTCGTGAGTGGCACACGTAGG2703990.16851862821714642No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC2690910.16770345373163414No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2626230.1636724532941011No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT2576410.16056756087298332No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA2389090.1488933648006473No Hit
CCGGCTCCGGGACGGCT2367010.14751729043978257No Hit
GCACGAGCGCACGTGTTAGGACCCGA2313600.14418866129060756No Hit
CGCCGCGACCGGCTCCGGGACG2274000.14172070183905672No Hit
AGCGGAGGAGAAGAAACTAACCAGGATTCCC2255410.14056213198541198No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2253120.14041941412823897No Hit
GGAGCACGAGCGCACGTGTTAGGACCCGA2222860.13853354410288723No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC2205800.13747032722805244No Hit
CCCCTTGTAAATTTAACTGTTAGTCCAAAGAG2087220.13008015975924184No Hit
CACGAGCGCACGTGTTAGGACCCGA2081690.1297355179469419No Hit
ATCCAAGATTGTCCGCACCAGTTCT2079600.12960526453144341No Hit
AACTAACCAGGATTCCCTCAGTAACG2025570.12623799561307741No Hit
CTCCATCTAAGGCTAAATACCGGCACGAGACCGA2007560.12511557264028877No Hit
ATTCCCCATGAACGTACACTGACTGGCTCAGCG1992310.1241651589626082No Hit
ATTCCCCATGAACTACACTGACTGGCTCAGCG1945940.12127527816037556No Hit
CCGCGACCGGCTCCGGGACGGCT1925430.11999704966665564No Hit
GACCCTGTTGAGCTTGACTCTAGTCTGGCACG1915110.11935388447625148No Hit
CTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGT1913690.11926538694036254No Hit
CAAATAAAGTATAGGCGATAGAAATTGAAACC1908710.11895502234266751No Hit
CCCCTTGTAAATTTAACTGTTAGTCCA1881030.11722994361491682No Hit
GAGCACGAGCGCACGTGTTAGGACCCGA1863780.11615488552049125No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG1807390.11264053619036618No Hit
CGACCGGCTCCGGGACGGCTGG1789330.1115149971071589No Hit
ACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGA1787340.11139097591249761No Hit
AGGGCTTCTGTCGTGAGTGGCACACGTA1765210.11001178544121429No Hit
GGAGGAAAAGTAATAGTGAAGCT1744540.10872358539415479No Hit
GCGACCTCAGATCAGACGTGGCGACCCG1718340.10709074353479538No Hit
CGACCGGCTCCGGGACGGCTGGG1710130.1065790782040572No Hit
CGACCTCAGATCAGACGTGGCGACCCGCTGAA1705100.10626559749594353No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA1638040.10208627020248393No Hit
ACGGACCAAGGAGTCTAACACGTGCGCG1630410.10161075175260177No Hit
CGGGACATGTGGCGTACGGAAGACCCG1625470.10130288004324163No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)