FastQCFastQC Report
Thu 14 Sept 2023
SRR14890802_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14890802_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18133986
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGTTGAACCCCATTCGTGATGGGGATCGGGGATTCATCTGGAATTCT279660.1542187139661407No Hit
CCCGGTTGAACCCCATTCGTGATGGGGATCGGGGATTCAACTGGAATTCT242700.13383709461339607No Hit
CCCAGTTGAACCCCATTCGTGATGGGGATCGGGGATTCAACTGGAATTCT219360.12096623434031546No Hit
CCCAGTTGAACCCCATTCGTGATGGGGATCGGGGATTCATCTGGAATTCT188700.1040587546499705No Hit
CCCGGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTACTGGAATTCT185550.10232168481877067No Hit
CCCTGTTGAACCCCATTCGTGATGGGGATCGGGGATTCAACTGGAATTCT184410.10169303097509837No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)