FastQCFastQC Report
Sat 16 Sept 2023
SRR15175564.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15175564.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113071421
Total Bases5.2 Gbp
Sequences flagged as poor quality0
Sequence length15-50
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA14704411.300453277225551No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA14254671.2606784166973546No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA10470280.9259881858210661No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA9867720.8726979737877354No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA9611220.850013196526468No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA9403160.8316124372399989No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA9316880.8239818618711796No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA9292770.821849581248298No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA6954980.6150961877449121No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAGA6885990.6089947343988894No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA6795580.6009989031622766No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA6420960.5678676312027598No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA6080240.5377344643081827No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA4626830.4091953527319693No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAAA4613780.40804121494148377No Hit
CCGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA3337700.2951851113642589No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAAA3137760.2775024822585364No Hit
GGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA3081580.2725339411804155No Hit
CCGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2987870.2642462590082776No Hit
CGCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2897490.25625308096198773No Hit
CGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA2872190.25401555712296214No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAAA2765810.2446073442377628No Hit
GCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA2678920.23692282066571005No Hit
CCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA2633480.23290412172320712No Hit
GCCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2448760.2165675445079973No Hit
CCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA2413880.21348276855917464No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA2387220.2111249667588417No Hit
GCGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA2356890.20844259134233395No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA2319180.20510753110637922No Hit
CCCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2191880.19384916016930576No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAAA2179250.19273216704334156No Hit
GGCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2108520.1864768286585874No Hit
CGGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA2085000.18439672744539046No Hit
GCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA2049940.18129603235463007No Hit
GCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA2035450.1800145414286427No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCGAAAAAAAAAAAAAAAG2004880.1773109404895513No Hit
GGGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1999650.17684840097658275No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAAA1941150.17167467984682No Hit
CCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1909690.16889236759481424No Hit
GCGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1882240.1664646984493102No Hit
CGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1816810.16067809035494476No Hit
GGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1587050.14035819006820477No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAAA1549070.1369992511193434No Hit
GGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA1536380.13587695161273333No Hit
GCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1480770.1309588211507486No Hit
GCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1477260.13064839788296284No Hit
CGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1471210.1301133378345002No Hit
CGCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1460180.12913784819242696No Hit
CCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1420800.12565509369516104No Hit
CGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA1419280.12552066538546464No Hit
CGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1389140.12285509350766892No Hit
GCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1374540.12156387421716404No Hit
GGCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1356680.11998434157823135No Hit
GCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA1342780.11875503006192874No Hit
GGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAGAT1329620.11759116390692569No Hit
CCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAAA1327870.11743639447141997No Hit
GGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1251190.11065484000594633No Hit
CCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1236000.10931144130575665No Hit
CGGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1198440.10598964702141667No Hit
CCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA1189960.10523967855679466No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAAG1171990.10365041755334445No Hit
GGGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1138590.10069653232712093No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)