FastQCFastQC Report
Thu 14 Sept 2023
SRR15175566.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15175566.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74815547
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA13835541.8492867531931565No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA13128581.754793024503316No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA10066231.3454730204672567No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA9602781.2835273395782296No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA9425401.2598183636884992No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAA8780321.1735956431622427No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA8688441.1613147732516076No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA8455881.130230324988468No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAGA6854570.916195934516124No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA6785420.9069532031891713No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAA6417440.8577682389998432No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA6126260.8188485208829657No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAA5524020.7383518829314981No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAAA4336650.5796455648449647No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAAA3341910.4466865690362459No Hit
CCGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2973020.3973799723739238No Hit
CCGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA2830380.3783144163872784No Hit
CGCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2709060.362098535482204No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAAA2700040.36089290371692395No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA2598530.3473248681854856No Hit
GCCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2319880.31007993565829306No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCGAAAAAAAAAAAAAAAG2309510.30869386011439576No Hit
CCCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA2088120.2791024170417413No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAAA2054660.27463008457319704No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAAA2054610.2746234014702853No Hit
GCGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA2011390.2688465273133671No Hit
GGCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1967680.2630041587479137No Hit
GCGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1823430.24372340684750993No Hit
CGGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1821090.24341063763123993No Hit
GGGCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1776710.23747871548676908No Hit
GGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAGAT1741740.2328045533102899No Hit
GGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1728900.2310883324825521No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1637370.2188542442922993No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA1616040.216003232590146No Hit
GCCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG1593560.21299850952102242No Hit
CGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1588160.21227673440655323No Hit
CCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1583610.21166857204158382No Hit
CGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG1557630.20819603176863763No Hit
CCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGGA1469570.19642575092046044No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCAAAAAAAAAAAAAAA1460460.19520808956993926No Hit
GCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1458970.19500893310316905No Hit
CCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA1405010.18779652844080655No Hit
GGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG1321280.17660500430478707No Hit
GCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1236710.16530120403985019No Hit
CGGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1225780.16384027774334123No Hit
GCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1225520.16380552560820014No Hit
CCCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1216950.16266004176912588No Hit
CGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA1194940.15971813986737277No Hit
GCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1188580.15886804917699793No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAAG1183620.15820508536815214No Hit
CCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1162370.15536476663065765No Hit
GGGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAA1132610.15138698377758303No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCACAAAAAAAAAAAA1099740.1469935119233974No Hit
GGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1090750.14579189001986445No Hit
GGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA1087140.14530936998963598No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAGAT1068470.14281389936238786No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCACAAAAAAAAAAAA1054050.14088649248263865No Hit
CGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAAA1047480.1400083327600345No Hit
CCGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGAAAAAAAAAAAAAA1019170.13622435989140064No Hit
CGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA1017120.13595035267201883No Hit
CCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAAA1008880.13484897731216214No Hit
CGGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA999150.13354844548553524No Hit
GCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA923430.1234275544359784No Hit
CGGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAGAT921530.12317359652533183No Hit
GCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA908120.12138118832440001No Hit
CCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAA880490.11768810565536598No Hit
CCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAA863990.11548268169448792No Hit
CCGCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTAAAAAAA863180.11537441542731754No Hit
GCCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA861860.11519798151044729No Hit
CGCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA861450.11514318006657091No Hit
GGCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAA820650.1096897680905815No Hit
CCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCAAAAAAA800040.10693499307035742No Hit
GGCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTAAAAA797580.10660618440709925No Hit
CCGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCAAAAAAAAAAAAA783680.10474828179763225No Hit
CGGGGGGGGATGCGTGCATTTATCAGATCAAAACCAAAAAAAAAAAAAAA782710.10461862960114428No Hit
CGGGGGGGGTCTCCCCCGCGGGGGCGCGCCGACAAAAAAAAAAAAAAAGA773030.10332478087742912No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCACAAAAAAAAAAAA765890.10237043378163097No Hit
GCCGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAAA762210.10187855740732604No Hit
GCCCCCCGCCCCTTGCCTCTCGGCGCCCAAAAAAAAAAAAAAAGATCGGA757470.10124499925129199No Hit
GCGGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCAAAAA751310.10042164097256417No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)