FastQCFastQC Report
Thu 14 Sept 2023
SRR15217948_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15217948_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18249059
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length66
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCCGTCTT254480.13944828607327095TruSeq Adapter, Index 7 (100% over 48bp)
TTGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCCGTCTT194700.1066904326409378TruSeq Adapter, Index 7 (100% over 48bp)
CTGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCCGTCTT191800.10510130960725153TruSeq Adapter, Index 7 (100% over 48bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)