FastQCFastQC Report
Thu 14 Sept 2023
SRR15219633.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15219633.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83872251
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length39
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGAAA32116863.8292593339363217No Hit
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTGG24514872.922882086472199No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCC22103672.635397254331471No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAAAA9296061.1083594262898704No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAAA8770881.0457427689641954No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAA8185140.9759056067304073No Hit
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTGA7854430.9364754023353923No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAA7566860.902188734626903No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGAAAA6779680.8083340937159299No Hit
GGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCGA6511020.7763020453570514No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGC5901240.7035986192858947No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGAAAA5590740.666578031868967No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCC5459950.6509840781547642No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAA5223080.6227423179568652No Hit
TTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAAAA5146860.6136546877703329No Hit
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTAA4490190.5353606164689678No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGCAAA4275340.5097442776395735No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAA4144370.49412886271527395No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGAA4127030.49206143280928516No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGA3771540.44967673515761486No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATAAAA3530840.42097832810043456No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAGAAAAAA3502960.4176542251143349No Hit
GGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCAA3279730.39103874772599106No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAAAAAAAAA3086780.3680335227917038No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCAAA2891030.34469445681146677No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGTAAA2778920.3313276997895287No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAACAA2743950.3271582635835063No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAAAAAA2722170.3245614571617972No Hit
GGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCG2643030.31512567845591744No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCGGAAAAA2563390.3056302852775467No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAA2517410.30014813838727183No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAA2491450.29705295497553774No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAAAA2470260.294526493631368No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCG2377940.2835192774306248No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAA2332170.27806216861879623No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGAAAAA2308130.27519590478142764No Hit
TCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCC2278450.27165718969436026No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAA2258400.2692666493474701No Hit
GGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCA2212000.26373442630030286No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAA2061130.24574635537086037No Hit
GCCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAA2058170.24539343769371352No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAAAAA2044820.2438017312782031No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCAAA2010550.23971575533366812No Hit
GATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAA2000670.23853777335724544No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAAA1994400.23779020787220795No Hit
GAACAATGTAGGTAAGGGAAGTCGGCAAGCCGGATAAAA1988490.237085564807364No Hit
GATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGAA1939910.23129342266013583No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGAAAA1911320.2278846671230989No Hit
GACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAAAAA1840720.21946710360736593No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAAAAA1834750.21875530680582306No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAA1808820.21566370026243842No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCAAAAAAA1806640.21540378116237752No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAA1802390.21489705814620377No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTAAAAA1759400.2097714058014253No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCA1714120.2043727191726379No Hit
CGGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAAA1626880.19397118601240357No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGAAAA1604990.1913612644067464No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAA1597480.19046585502993119No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAAAAAAAA1584680.18893972453416089No Hit
CCCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAA1552600.1851148599791366No Hit
GATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTGGT1538120.18338842485579646No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAA1492450.17794323893846606No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATTAAAAA1484920.1770454449827512No Hit
GTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAA1475590.17593303892606865No Hit
CCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAA1448890.1727496260950478No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCA1442870.17203186784625585No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGTAAA1423040.16966755786726173No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAA1414470.16864576580876553No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCGAAAAAA1406080.16764543496036607No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAAAA1381170.16467544194086314No Hit
CACCGTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCG1336570.15935783099466355No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACCAAAAA1291270.1539567597869765No Hit
GGTGGATCACTCGGCTCGTGCGTCGATGAAGAAAAAAAA1285560.153275962511129No Hit
CATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAAAAA1264340.1507459242986098No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATACAA1257700.14995424410392896No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGAAAAA1257520.1499327828938322No Hit
CGTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGA1249010.14891814457203492No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAAAAA1229600.14660391074993326No Hit
CGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGAAAAAA1213350.1446664403939749No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGTAA1201630.1432690771587852No Hit
GGGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGAAAA1153390.13751747285285096No Hit
GATAACTGTGGTAATTCTAGAGCTAATACATGAAAAAAA1151730.13731955280418073No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAACCAAAAAA1132240.1349957806664805No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGAAAAA1129720.13469532372512572No Hit
GTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCGAA1119390.1334636887234611No Hit
GCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAAAAAA1103440.13156198705099736No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAA1103420.1315596024720977No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAA1078060.12853595642735283No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAA1053160.12556715569729968No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTGAA1035590.12347230313396501No Hit
GATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCAAA1022400.12189967334965172No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGCAAAA1009160.12032108211808934No Hit
CCGACCCGGGGAGGTAGTGACGAAAAATAACAATAAAAA1008330.12022212209375421No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATAA1004870.11980958994411632No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGACAAAA991070.11816423050336397No Hit
GGGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAA970360.11569499905278566No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCAA969160.11555192431880719No Hit
GGGCCCATACCCGGCCGTCGCCGGCAGTCGGAACGGAAA967890.11540050355867998No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTAA957490.11416052253086661No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACAAAAAA950860.1133700346256356No Hit
CATTCGTGATGGGGATCGGGGATTGCAATTATTCAAAAA932400.11116906830126688No Hit
GGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAAAAAA931190.1110248012778386No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAAA921720.10989570316885856No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGT890320.10615191429642207No Hit
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGCAA881410.10508958439663196No Hit
CATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGAAA859440.10247012447537625No Hit
GATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTGGA838760.10000446989314737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)