FastQCFastQC Report
Thu 14 Sept 2023
SRR15219634.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15219634.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83920001
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length38
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTG37784904.502490413459361No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCC29651103.5332578225302926No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGAA25297023.014420841105567No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGG11317751.3486355892679267No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAA8544371.0181565655605747No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAAA7847190.9350798267983814No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGC7244110.8632161479597694No Hit
TCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGCC7189060.8566563291628178No Hit
GGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCG7133590.8500464627020202No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAA6914980.8239966536702019No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAA6805790.8109854526812982No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCC6464320.7702955103634949No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGAAA5499550.65533245167621No Hit
GGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGC5489160.6540943678015447No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGAAA5360810.6388000400524304No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAA4843240.5771258272506455No Hit
GATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTGG4644500.5534437493631584No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAA4594810.5475226340857646No Hit
TTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAAA4553820.5426382204166085No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATAAA4135010.4927323582848861No Hit
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTA3696770.4405111958947665No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAACA3661960.43636319785077216No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGCAA3457040.4119447043381232No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGA3336970.39763703053340044No Hit
GGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCA3321940.39584603913434174No Hit
GCCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCA3039800.36222592514030116No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAA2939010.3502156774283165No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAACC2759030.3287690618592819No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAGAAAAA2751240.3278407968560439No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAAAA2722060.32436367582979414No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAA2618130.3119792622500088No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAAAAAAAA2483760.29596758465243583No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGTAA2465310.29376906227634575No Hit
CACCGTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCC2386160.28433746086347167No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAAAAA2385940.2843112454205047No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTA2379120.28349856668852996No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCAA2343910.2793029042027776No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATACA2296830.27369279940785507No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAA2221540.26472115985794614No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAA2146880.2558245918038061No Hit
CCCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAA2029320.2418160123711152No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGAAA1991540.23731410584706736No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCGGAAAA1966440.23432316212674975No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAAA1919060.2286773090005087No Hit
GACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAAAA1881890.22424809075014193No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTAAAA1877200.22368922517052875No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAA1867190.22249642251553356No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGAAAA1842320.2195328858492268No Hit
GTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGA1784860.21268588879068293No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAAAA1732430.2064382720872465No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAA1731190.20629051231779655No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAA1672120.19925166588117654No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAAA1656640.19740705198514No Hit
GATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGA1623490.1934568613744416No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAAA1594890.19004885378874103No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATTAAAA1569100.18697568890639074No Hit
CCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAA1533470.18272997875679245No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCAA1532970.18267039820459488No Hit
GAACAATGTAGGTAAGGGAAGTCGGCAAGCCGGATAAA1503630.1791742114016419No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAA1474930.17575428770550183No Hit
CGTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGG1425760.16989513620239352No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATA1359080.16194947376132657No Hit
CGGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAA1333460.1588965662667235No Hit
GTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCGA1311270.15625238136019565No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGAAAA1300140.1549261182682779No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA1296730.15451977890229052No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAA1289610.15367135183899724No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGAAAA1289590.15366896861690932No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACCAAAA1288610.15355219073460213No Hit
GGGCCCATACCCGGCCGTCGCCGGCAGTCGGAACGGAA1267600.15104861593126054No Hit
GATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAA1262860.15048379229642764No Hit
GGGCGGAGGAAGCTCATCAGCGGGGCCACGTGCTGAGT1257590.14985581327626535No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAG1225990.14609032237737937No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGTAA1202490.14329003642409394No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAA1198030.14275857789849167No Hit
GGGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGAAA1171240.13956625191174626No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAACCAAAAA1152800.13736892114670016No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGTA1139960.13583889256626677No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCAAAAAA1126380.13422068476858096No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAAAAAAA1121510.13364037019017672No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAA1099520.1310200175045279No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGACAAA1074010.12798021773140827No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAAAA1055970.12583055140812022No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTGA1055050.1257209231920767No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAA1043950.12439823493329082No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGAAA1043040.12428979832829125No Hit
CATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAAAA1010060.12035986510534001No Hit
GCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAA966850.11521091378442667No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGGAAA948210.11298975079850153No Hit
GGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGAA945360.11265014165097542No Hit
CATTCGTGATGGGGATCGGGGATTGCAATTATTCAAAA938700.11185652869570391No Hit
GGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAAAAA934010.11129766311609077No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTA929850.11080195292180704No Hit
GGTGGATCACTCGGCTCGTGCGTCGATGAAGAAAAAAA922250.10989632852840409No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAT896500.10682793009022962No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCGAAAAA896380.10681363075770221No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGCAAA889730.10602120941347462No Hit
GATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTGA882250.10512988435259908No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCA880240.10489037053276488No Hit
CGCCCGGGGGCCCGAGGTGGGATCCCGAGGCCTCTCCA855900.10198998925178755No Hit
GCGCCCTGGAATGGGTTCGCCCCGAGAGAGGGGCCCGT841560.10028121901476145No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)