FastQCFastQC Report
Thu 14 Sept 2023
SRR15219635.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15219635.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64260871
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length37
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGT52680138.19785495904654No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGC28544854.4420266261252515No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGA19246082.9949920846855624No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAG10171611.58286214327845No Hit
GGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGC9160051.4254475324494122No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGG8043091.2516310275346252No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAAC7955761.2380411090288521No Hit
GATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGTG6790261.056671018355789No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAA6520291.0146594496050325No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAA6511351.0132682453059187No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCA6079760.9461060681857237No Hit
TCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAGC6035780.939262089989412No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCC4986000.7758998473581225No Hit
GGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGG4567050.7107046526026701No Hit
TTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAA3934640.6122917319312401No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAA3928260.6112989038072639No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGAA3862150.6010111503157185No Hit
GCCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCC3186340.4958445085501565No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGAA3173730.49388219465621624No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA2558940.39821122250272645No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTA2533970.39432549863819927No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGCA2475610.385243766770606No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTA2413440.3755691391111085No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAGAAAA2341630.36439437616710796No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAAAAAAA2286800.35586196769726325No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAAA2261320.35189687982909534No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGAA2247150.3496918054534306No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATAA2213520.3444584496839453No Hit
CCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCA2005670.31211372780801555No Hit
GACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAAA1961830.30529153580878166No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTAAA1788320.2782906568446606No Hit
CACCGTGGCGGTGCGCCGCGACCGGCTCCGGGACGGC1728140.2689257044150553No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGAAA1719850.26763565031666003No Hit
GATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCG1700650.26464782900312694No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGAAA1691830.2632752985872227No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCGGAAA1679660.26138145559838427No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATAC1670520.2599591281605878No Hit
GGGCGGAGGAAGCTCATCAGCGGGGCCACGTGCTGAG1630840.25378429744595277No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAAAA1627240.2532240809496653No Hit
CCCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCA1524510.23723768076532917No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAA1480190.230340793233257No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAAA1458010.22688923715335263No Hit
GTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCG1450080.22565520470458608No Hit
GTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGG1414840.22017130766870557No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGTA1405380.2186991832090169No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCA1388250.21603348638084907No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGGAA1343350.20904634174659723No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAA1267110.1971822012807763No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAA1252160.19485574666424924No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAA1212740.18872137602990163No Hit
GAACAATGTAGGTAAGGGAAGTCGGCAAGCCGGATAA1203930.18735040177093149No Hit
GGGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGAA1191370.18539586866166194No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAA1184130.1842692110413505No Hit
GGAACGATACGGCAGCGCCGAAGGAGCCTCGGTTGGC1183990.18424742484427264No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT1181780.1839035141618295No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAA1120570.1743782775680087No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCA1110300.1727801043966553No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAA1102260.17152895422161335No Hit
GGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGA1062080.1652763156602717No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACCAAA1062010.1652654225617328No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAA1054820.164146545726092No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATTAAA1052130.16372793951081055No Hit
GGGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGG1028490.16004918451852293No Hit
CGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGAAAA1003920.15622570693136106No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAA999720.1555721210190257No Hit
CAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG987950.15374052430755258No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGAAAA975300.15177198578587583No Hit
CGGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAA956040.14877482753073795No Hit
CGTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGG955400.14867523348695352No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAG947560.14745520645059418No Hit
GGGCCCATACCCGGCCGTCGCCGGCAGTCGGAACGGA938450.1460375474836001No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAACCAAAA889150.13836569379833025No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAA883610.1375035828568212No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGGC877360.13653098477298883No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAT863470.13436948279147976No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAA860010.13383105249227012No Hit
GGCGGCGCGCGTCCGGCCGTGCCGGTGGTCCCGGCGG842120.13104708773710833No Hit
CGAAGGAGCCTCGGTTGGCCCCGGATAGCCGGGTCCC825420.12844830565710819No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAA803080.12497185106625773No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAAAAAA799730.12445053849332356No Hit
GCCGCGAGGCGTCCAGTGCGGTAACGCGACCGATCCC787220.12250378616872468No Hit
CCAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC749610.11665107993945492No Hit
TCCAGTGCGGTAACGCGACCGATCCCGGAGAAGCCGG741790.11543416521696383No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCT722960.11250392170999363No Hit
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGC712170.1108248283780654No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGG710770.11060696640728696No Hit
GAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAA704980.10970595154242463No Hit
GGAAACTCGACTGCATAATTTGTGGTAGTGGGGAAAA704190.1095830151446282No Hit
GGGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT699880.1089123115060174No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAA699600.10886873911186172No Hit
GACCAAGGAGTCTAACGCGTGCGCGAGTCAAAAAAAA699230.10881116130529883No Hit
GGAAACTCGACTGCATAATTTGTGGTAGTGGGGGAAA699040.10878159432355033No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGAAA698730.10873335345859224No Hit
GCGCCCTGGAATGGGTTCGCCCCGAGAGAGGGGCCCG690250.10741373237844846No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGCAA686230.10678815729092749No Hit
GGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAAAA684380.1065002682581131No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCAAAAA680740.10593382713408911No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGT672410.1046375484079573No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAAA659760.10266900988628055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)