FastQCFastQC Report
Thu 14 Sept 2023
SRR15219636.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15219636.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76342985
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length36
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGG70062089.177278043293697No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGG42427845.557529614541532No Hit
TCTCGCCCGTCACGTTGAACGCACGTTCGTGTGGAA13376701.7521845654843073No Hit
GGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGG11964871.5672520533484513No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAA10769761.4107072182205085No Hit
GATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCGGT9622981.2604930236877692No Hit
CAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC9545261.2503126515160496No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAA7783661.0195645349733182No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGA7424600.9725320538619233No Hit
TTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAA7274220.9528341078096435No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAG6903460.9042690693846986No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCA6475590.8482233174403646No Hit
GGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGG6308490.8263352552955585No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT5816100.7618381701999207No Hit
TCTCAACCTATTCTCAAACTTTAAATGGGTAAGAAG5630390.7375124250119378No Hit
GCCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGC4463420.5846535867047902No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGC4347950.5695284249102914No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT3904090.5113881779707723No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGATA3511870.46001214125960627No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAGAAA3362810.4404870991093681No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGA3334580.4367893133861611No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCGGAA3231370.4232700620757755No Hit
GATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCC3229610.42303952353972013No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGAA3056530.40036815432354395No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGA2917540.38216215936539555No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGA2599660.34052375604647894No Hit
CCCTTCCCGGGGGGGGATGCGTGCATTTATCAGATC2490350.326205479128174No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAG2462070.32250114401473823No Hit
GCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTAA2391410.31324554574333185No Hit
CCGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCC2391110.3132062494019588No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGC2310310.3026224347921423No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAAAAAA2276690.2982186248022657No Hit
GTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGC2180090.28556520288013365No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGC2112950.2767706816808381No Hit
GACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGGAA1999420.2618996362272185No Hit
CAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA1886570.2471176624807112No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGGGA1833780.24020281627709475No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGATTAA1814700.23770356896576678No Hit
CTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAA1804480.2363648736029905No Hit
GAACAATGTAGGTAAGGGAAGTCGGCAAGCCGGATA1764450.23112143178577574No Hit
GGGAAACTCGACTGCATAATTTGTGGTAGTGGGAAA1738030.2276607339888531No Hit
CACCGTGGCGGTGCGCCGCGACCGGCTCCGGGACGG1737350.22757166228174075No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAAAAAA1735960.22738958923337882No Hit
GGGCGGAGGAAGCTCATCAGCGGGGCCACGTGCTGA1700670.22276702960985872No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGAA1698180.22244086997646215No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAAA1666820.2183330924249294No Hit
CGCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCA1634810.21414017280042166No Hit
GGGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGA1546120.20252286441249318No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACCAA1538930.201581062097585No Hit
GGAACGATACGGCAGCGCCGAAGGAGCCTCGGTTGG1522380.19941321393183667No Hit
CAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC1520140.19911980124958437No Hit
GTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTA1477020.19347160711622685No Hit
GGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCC1472900.19293193736136988No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAA1405050.18404441482082473No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGAAAA1402330.18368812799237547No Hit
GCAGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAA1401540.1835846476267597No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAACCAAA1380970.1808902284866121No Hit
GGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG1363900.1786542666624838No Hit
GGGCCCATACCCGGCCGTCGCCGGCAGTCGGAACGG1357620.17783166324974062No Hit
GTGGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGG1342410.17583933874212543No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGT1341910.17577384483983693No Hit
GGAAACTCGACTGCATAATTTGTGGTAGTGGGGAAA1332050.17448230508670834No Hit
CGGGGGGGGATGCGTGCATTTATCAGATCAAAAAAA1326170.17371209679579597No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGG1276810.16724653876187837No Hit
GGGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGG1231100.1612590862146666No Hit
GATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGC1195700.15662211793264308No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAAA1179510.15450142537654246No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG1153920.15114944745741865No Hit
GGGATTCAACCCGGCGGCGCGCGTCCGGCCGTGCCG1152700.15098964233583478No Hit
GGAAACTCGACTGCATAATTTGTGGTAGTGGGGGAA1081170.1416200846744465No Hit
CCAGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1037730.13592997444362437No Hit
GGGTTCCTCCCGGGGCTACGCCTGTCTGAGCGTCGC989690.12963732031174835No Hit
GAACCACCTCACCCCGAGTGTTACAGCCCTCCAAAA973930.12757295251161585No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAA966930.1266560378795773No Hit
GCGCCCTGGAATGGGTTCGCCCCGAGAGAGGGGCCC952000.12470038995724361No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTAGAAAAA945290.12382146178853237No Hit
GATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTG940290.12316652276564768No Hit
GAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGA931130.12196667447572296No Hit
TCCAGTGCGGTAACGCGACCGATCCCGGAGAAGCCG931100.12196274484158563No Hit
TTCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAA926990.12142438496477444No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCCAA923470.12096330789266362No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGA920000.12050878021078165No Hit
CGAAGGAGCCTCGGTTGGCCCCGGATAGCCGGGTCC883250.11569497839257924No Hit
GGGGGGGGATGCGTGCATTTATCAGATCAAAACAAA860250.11268225888730968No Hit
GGGGGGGATGCGTGCATTTATCAGATCAAAAAAAAA859190.11254341181445814No Hit
GAGTCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG856230.1121556879129104No Hit
CGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGAAA830450.10877882231091697No Hit
GGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAAA805840.10555521244027856No Hit
CATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAA793680.10396240073662301No Hit
GGACCAAGGAGTCTAACGCGTGCGCGAGTCAGGGCA789970.10347643598164259No Hit
CGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCC777030.10178145379041703No Hit
CCTTCCCGGGGGGGGATGCGTGCATTTATCAGATTA763820.10005110489195569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)