FastQCFastQC Report
Thu 14 Sept 2023
SRR15283615_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15283615_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52407941
Total Bases4.4 Gbp
Sequences flagged as poor quality0
Sequence length84
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAGATCGG15215912.9033596263589136No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAGATCG10325381.9701937918148702No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAGATCGGA9724171.855476443922878No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAGATCGG6177571.1787469383695115No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAGATCGGA5588081.066265892796666No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAGAT5479041.0454598855543666No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAGATCG5335041.0179831335102443No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAGATC4525720.8635561545911526No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAGATC4170350.7957477283833762No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAGATCGGA3794280.7239895190692571No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAGATCGGA3666330.6995752800133858No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAGATCGG3335320.6364150043597401No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAGATCGGAA3150760.6011989671565231No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAGATCGGA3136370.5984532000598917No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAGATCGG2769080.5283703093773519No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAGATCG2754730.5256321747118438No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAGATCGGAA2292200.4373764655245662No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAAGATCGGAA2234870.42643728361699995No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGAAAAAAAAAAAAAGATCGGAA2194290.4186941822423438No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAGATCGGAA2118670.40426507120361777No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAGATCGG1812460.34583690284645985No Hit
GTCGCGGCGTGGGAAATGTGGCGTACGAAAAAAAAAAAAAGATCGGAAGA1786640.3409101685563262No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAGATC1770520.3378342988136092No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAGATCGG1724850.3291199705785045No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAGA1692450.3229377013685769No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAAGA1623860.30984999009978276No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAAG1573860.3003094511955736No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAGATCGGAA1564250.29847575961818457No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAAAAAGATCGGAAG1479320.2822702002354949No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAGATCGGA1447330.27616616344458184No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAGAT1430070.2728727694148488No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAGA1429780.27281743428920435No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAGATCGG1326180.2530494376796829No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAGATCG1263410.24107224513933873No Hit
GTCGCGGCGTGGGAAATGTGGCGTACGGAAAAAAAAAAAAAGATCGGAAG1232300.23513612183313973No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAGATCGG1175930.22438011827253432No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGGAAAAAAAAAAAAAGATCGG1109510.21170646639218282No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAGATC1040020.19844702542311288No Hit
CGCGGCGTGGGAAATGTGGCGTACGAAAAAAAAAAAAAGATCGGAAGAGC1036340.19774484175976306No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAGATCGG965910.184306038659294No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAGATCGGAA938950.17916178008214442No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAGATCGGAA920180.17558026177750427No Hit
GTCGCGGCGTGGGAAATGTGGCGTACAAAAAAAAAAAAAGATCGGAAGAG915480.17468345112050865No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAGATCGGA900840.17188998132935618No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGAAAAAAAAAAAAAGATCG899010.17154079760546212No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAAGATCG896880.1711343706481428No Hit
ACGGTGGCCATGGAAGTCGGAATCCGCTAAAAAAAAAAAAAGATCGGAAG868480.16571534455055198No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTTGAAAAAAAAAAAAAGATCGGA849010.16200025870125292No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAGATC824830.15738645408717736No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAATAAAAAAGATCGG804930.1535893196033021No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAGATCG799570.15256657383277086No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAGATCG789360.15061839578853134No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAAAAAAAAAG784290.14965098514364455No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAGATCGG781550.14912816361169387No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAAGA779120.14866449342094934No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAGAT774090.14770471520718587No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAGATCGGAAG757190.14448001305756317No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAGATCG751470.14338857540692163No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAGGAAAAAAAAAAAAAGATCG750400.14318440787437156No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAGATCGG730590.13940444636052388No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAGATCGGAA712170.13588971182821322No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAAAAAAAAAAAAGATCGGAAGAG706120.1347353066208039No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAGATC694040.13243031242154696No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAATAAAAAAAAGATCG685930.13088283701128423No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAGATCGG677990.1293677994332958No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAATAAAAAGATCGG638570.12184603856121728No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAATAAAAAAAGATCG634060.12098548195205762No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAGATCGGA626300.11950479031412435No Hit
CGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAGATCGGAA617600.11784473654479194No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAGATCG614380.11723032583936088No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAGATCGGA611860.11674948267858871No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCAAAAAAAAAAAAAGA601140.11470399113752627No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAGATCGGA595430.11361446159466558No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAGATCGG589910.11256118609964089No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCGAAAAAAAAAAAAAGATC589510.11248486178840722No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAGATC577360.11016651083468439No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAATAAAAAAAGATCGG566090.10801607336567563No Hit
TGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAAAAAAGATCGGAAGA563650.10755049506715021No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCGAAAAAAAAAAAAAGATCGG560210.10689410599054062No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAATAAAAAAGATCGGA559890.1068330465415537No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAGATCGG556080.10610605747705296No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAAAAAAAAAAAAAGATCGGAA553250.10556606297507472No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAATAAAAAGATCGGA552020.10533136571803116No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAAGATCGGA540750.10318092824902242No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)