FastQCFastQC Report
Thu 14 Sept 2023
SRR15283616_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15283616_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35957044
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCTCTGTAGGCACCATCAATAGATCGGAAGAGCACACGTCTGAACTC391740.10894666424748375Illumina Multiplexing PCR Primer 2.01 (100% over 27bp)
AAAGCTCTGTAGGCACCATCAATAGATCGGAAGAGCACACGTCTGAACTC375100.10431892009810373Illumina Multiplexing PCR Primer 2.01 (100% over 27bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)