FastQCFastQC Report
Thu 14 Sept 2023
SRR15283619_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15283619_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52185415
Total Bases4.3 Gbp
Sequences flagged as poor quality0
Sequence length84
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAGATCGG19364633.7107360361127726No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAGATCGG10079281.9314362068405513No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAGAT8445721.61840621560641No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAGATCG8380931.6059908692879037No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAGATCG7966491.526574043724669No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAGATCGGA7094751.3595273698599502No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAGA5586831.0705730710391017No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAGATC5332541.021844896701502No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAGATCGGA5293741.014409869117645No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAGATCGGA4766540.9133854736998834No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAGATCGGA4683060.8973886669292559No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAAG4294950.8230173124042417No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAGATCG3409690.653379876350509No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAGATCGG3115900.5970825373334676No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAAAAAAAAAG3057230.5858399324792185No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAAGA2824440.541231683220302No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAGATCGG2520280.4829471989443794No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAGATCGGA2297290.4402168690236534No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAGA2151080.4121994622443838No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAGATCG1961800.37592879159818887No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAGATCGG1940050.3717609604139394No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGAAAAAAAAAAAAAGATCGGAA1801620.34523439163988634No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAGATCGGAA1766760.33855436427975133No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAGATCG1760230.3373030568023652No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAGATCGG1704820.3266851475646979No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAGATCGGAA1689170.32368622535626096No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAGATCGGA1661130.31831307655596874No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAGATC1524610.2921525104284406No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAGATC1494730.286426772691182No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAGATCGG1451000.27804703670556224No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAGATC1397210.2677395590319632No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAG1355250.25969899827375137No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAGATC1304060.24988974409803966No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAGAT1301440.24938768811170708No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAGATCGG1299510.2490178529767369No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAGATCGG1274920.24430580843325667No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAGATC1250730.23967041365868222No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAGATCGG1186500.22736237701664344No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAGATCGGAA1176440.22543463532866417No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAGATCGGA1141190.21867987444384604No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAATAAAAAAGATCGG1119880.21459635800539287No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGAAAAAAAAAAAAAGATCG1087130.20832065817623563No Hit
GTCGCGGCGTGGGAAATGTGGCGTACGGAAAAAAAAAAAAAGATCGGAAG1028850.19715278684666973No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAAAAAGATCGGAAG1023320.19609310379154787No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAAAAAGATCGGAA1000590.19173748067347937No Hit
GTCGCGGCGTGGGAAATGTGGCGTACGAAAAAAAAAAAAAGATCGGAAGA999740.19157459991455467No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAGATCG926760.1775898495777029No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAAGA910840.17453918877525454No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAGAT891150.17076610390086963No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTTCAAAAAAAAAAAAAGATCGGA868590.16644305693458603No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAATAAAAAGATCGG849180.16272362689843514No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAGAT824000.15789852394581896No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAGATCGG817760.15670278755088946No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAAGATCG809120.15504715254252552No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAAA802790.15383416994959226No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAATAAAAAAAGATCGG793220.15200032422852247No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAAAAAAAAAAAAGATCGGAAGAG778030.1490895492543271No Hit
CGCGGCGTGGGAAATGTGGCGTACGAAAAAAAAAAAAAGATCGGAAGAGC761940.1460063123000938No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAGATCGGAA751330.14397317717986913No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACAATAAAAAAAAAAGAT743600.14249192039576575No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAGATCG720150.13799832769366688No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAGATCG702570.13462957035025974No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAATAAAAAAGATCGG699440.13402978590857234No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAGA682940.1308679829412107No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAGATCGGAA650860.12472067147497054No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCGAAAAAAAAAAAAAGATCGG640810.12279484603121389No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAGATCGGAA638960.12244034085002486No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAGATCGGA628420.12042061943935867No Hit
GCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAGATC624740.1197154415654259No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAAG622930.11936860136112744No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAATAAAAAAAAAAGA612480.11736612614846505No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCAAAAAAAAAAAAGA608880.11667627822831342No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAATAAAAAAAAGATCG607030.11632177304712436No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAGAAAAAAAAAAAAAGATC605790.11608415876351659No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGAAAAAAAAAAAAAGATCGGAAG602160.11538856211069702No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAATAAAAAAAGATCGG596760.11435379023046956No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCAGGAAAAAAAAAAAAAGATCG594590.11393796523415595No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAGATCGGA576880.11054429671585442No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAAGATC570720.10936389027470605No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAGAAAAAAAAAAAAAGAT559880.1072866815373606No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAGATCGGAA556800.1066964783167864No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAATAAAAAAAGATCG553450.10605453650220084No Hit
GTCGCGGCGTGGGAAATGTGGCGTACAAAAAAAAAAAAAGATCGGAAGAG552450.1058629120799365No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGGAAAAAAAAAAAAA541850.10383169320393447No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCGCAAAAAAAAAAAAAGAT539200.10332388848493396No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGATAAAAAAAAAAAG538910.1032683174024773No Hit
GCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAGATCG529810.10152453515987177No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)