FastQCFastQC Report
Tue 5 Sept 2023
SRR15324735_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15324735_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14902971
Total Bases454.8 Mbp
Sequences flagged as poor quality0
Sequence length20-44
%GC73

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCCGAGGTGGGATCCCGAGGCCTCTCC7320304.911973592379667No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCTCTCC7076524.748395470943344No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTCTCC6226804.178227280989811No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCTCC4348262.9177135216863803No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC3826742.5677698762213255No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC3462092.3230871213531854No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG2878161.9312659200638584No Hit
AGATCCCCGAATCCGGAGTGGCGGAGATGGGCGC2700361.8119608499540127No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC2328251.5622723817955493No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC1996221.339477879947562No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG1575201.0569704524017394No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1574421.0564470668298287No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCG1550161.0401684335291266No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC1381920.9272781917109011No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA1310070.8790663284522261No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT1305860.8762413883781967No Hit
CCCCCGCGGGGGCGCGCCGGC1130170.7583521433410828No Hit
ACAGTCCGACGATCCAGAGTT1107900.7434088142558957No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG1039490.6975052155707744No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCT1022070.6858162711314408No Hit
CAGTCCGACGATCCAGAGTT1018410.6833603849863226No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTC1007390.6759658862652286No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG932400.6256470605760422No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCTC900770.6044231046279295No Hit
TACAGTCCGACGATCCAGAGTT885120.5939218428325466No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCTCTC859510.5767373498881532No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT844740.5668265743790282No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTGTGGG835990.5609552618736224No Hit
CGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG822940.5521986186512743No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGC797930.5354167299929659No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG784900.5266735069134872No Hit
ACAGTCCGACGATCAGAGTT730540.49019755859418906No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCTCT608940.4086030899476353No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCT593310.3981152482951218No Hit
TACAGTCCGACGATCAGAGTT589950.39586066429304595No Hit
CGGCCGAGGTGGGATCCCGAGGCCTCTC561890.3770322038471389No Hit
CGGCCGAGGTGGGATCCCGAGGCCTCTCCAGT557710.3742273939874136No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCTC550800.3695907346260018No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTCTC521180.34971550303627374No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC520250.3490914663928421No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC519910.3488633239640606No Hit
AACGATGCCGACCGGCGATGCGGCGGCG510760.34272360860126483No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC485500.3257739681570876No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC485310.3256464767998274No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG485160.32554582572830615No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGG473240.3175474205780847No Hit
AGATCCCCGAATCCGGAGTGGCGGAGATGGGCG457720.3071333897113535No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGT447140.3000341341333886No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGT443450.297558117773966No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCT428750.2876943127648843No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGG419430.28144052618769777No Hit
CCGGCCGAGGTGGGATCCCGAGGCCT410810.2756564446109437No Hit
CGGCCGAGGTGGGATCCCGAGGCCTCT375130.25171490973175753No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTCT374390.25121836444558604No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG367880.24685010794156412No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCC360650.24199872629424024No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT356160.23898590422003776No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG340330.2283638611388293No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTA335750.225290648421714No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCT332680.22323065649124596No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTT303190.2034426558301697No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTC295430.1982356403968041No Hit
TTGCGACCCGGGTTCGTTTCCCGGGCGGCG291500.19559858232294755No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGT290480.19491415503660312No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC285410.19151214881918513No Hit
TAAGTGGGAGGCCCCCGGCGCCCCCCCGG277640.18629842331438476No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTC260750.17496511266109288No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCTCC244450.1640276962224512No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCC238490.1600284936473405No Hit
CGGCCGAGGTGGGATCCCGAGGCCTC231110.1550764609284954No Hit
AGGCGGCCCGGGTTCGACTCCCGGTGTGGG230930.1549556796426699No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCTCTCCAGT228540.15335197256976477No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCC225520.15132553099647042No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC216870.14552131920541211No Hit
CGGCCGAGGTGGGATCCCGAGGCCT210420.14119332312999872No Hit
GTGTTATCGCAAGGCATTTACGTATGAGTGTCAGC201930.1354964724818964No Hit
TTGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC194220.13032300740570454No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGG193380.1297593614051856No Hit
TCTTGCGACCCGGGTTCGGTTCCCGGGCGGCG192600.12923597583327512No Hit
TACAGTCCGACGATCGAGTT182990.12278759718448086No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTTA181850.12202264904091942No Hit
ACTCCGGATGTGCTGACCCCTGCGA181700.12192199796939819No Hit
TCTTGCGACCCGGGTTCGATTCCCGGGCGGCG171530.11509785532025794No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT165770.11123285417384224No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGA154480.10365718352401009No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGG152910.1026037023087544No Hit
AGATCCCCGAATCCGGAGTGGCGGAGATGGG149630.10040279887815658No Hit
CCCCGCGGGGGCGCGCCGGC149460.10028872766376584No Hit
CGGCCGAGGTGGGATCCCGAGGCCTCTCCAGTC149040.10000690466350635No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)