FastQCFastQC Report
Sat 23 Sept 2023
SRR15348413.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15348413.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147626185
Total Bases22.1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC15008041.0166245236236378No Hit
GGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG13675690.9263729195467592No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA10157430.6880507004905668No Hit
CCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG9472510.6416551372644358No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA9290280.629311121194387No Hit
CCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC8479710.5744041952990928No Hit
CGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC8364880.566625764934588No Hit
CGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC8057990.5458374474690924No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA8039070.5445558320158447No Hit
GCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC7931680.537281377284118No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA7551280.5115135908985252No Hit
CCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG7014880.4751785735030679No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6509080.44091635911339166No Hit
GCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG6175080.4182916465666304No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6160700.417317564631234No Hit
GGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC6053430.4100512385387457No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6018730.407700707025654No Hit
GCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA5626510.381132249675083No Hit
GCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC5401720.3659052762218301No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA5386710.3648885189304323No Hit
GGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC5315460.36006213938265763No Hit
GGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG5108440.3460388819232848No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA5077380.3439349191337566No Hit
CGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA5075240.3437899584006726No Hit
GGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA5061240.3428416171561976No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA4959650.33596004665432494No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA4919190.3332193404577921No Hit
CGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG4307640.2917937627393135No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA4226480.28629609306777115No Hit
CGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA4207300.2849968655628404No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA3869550.26211813303988046No Hit
CCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3677800.2491292449235886No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA3631560.24599700927040824No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA3572000.24196249466177022No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA3503270.23730681653800104No Hit
CCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA3483000.23593375389332183No Hit
CCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG3437150.23282793631766613No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3356730.22738039325476034No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA3336880.22603578084741538No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA3327910.22542816506434818No Hit
GCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3294970.22319685359341906No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3244940.21980788841762725No Hit
GGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3219580.21809003599192106No Hit
CGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG3155830.21377169639654375No Hit
CCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA3124870.21167450747304756No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3105470.21036037746284647No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA3046440.20636176434417783No Hit
GCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG2996660.20298973383346594No Hit
GCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2924470.19809967994499078No Hit
CGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA2922940.1979960397947017No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2848630.19296237994634893No Hit
CCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA2830500.1917342780347538No Hit
CGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2765290.18731703999530977No Hit
CGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2727020.18472468146487697No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2625790.17786749688071937No Hit
GGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2619880.17746716139823027No Hit
GGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2612660.17697808827072242No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2571470.17418793285215628No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA2554950.17306889018367577No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA2523600.1709452831826549No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA2503200.16956341451213414No Hit
CGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2458740.16655175367432276No Hit
GCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA2438750.16519765785453305No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2419370.16388488261753834No Hit
GGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA2404330.16286609316633088No Hit
CGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA2400330.1625951385250523No Hit
CGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2387320.16171385855429374No Hit
CGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAA2371780.16066119977292648No Hit
GGGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA2314770.15679941874810352No Hit
GGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2300300.15581924033327826No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2292910.1553186516335161No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2287350.15494202468213888No Hit
CGCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA2275040.15410816177360406No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2260800.15314356325065231No Hit
GGGGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAAAA2260170.15310088789465096No Hit
CGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2222660.15056001074606107No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2182260.14782336886914743No Hit
CCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2140410.1449885059347703No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2129140.14422509123296792No Hit
GCGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG2108900.1428540607480983No Hit
CCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2090950.14163815179536068No Hit
CCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAA2081300.14098447372327613No Hit
CGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA2068970.14014925604153491No Hit
CCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2065480.13991284811701934No Hit
CCGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG2051170.13894350788784524No Hit
CGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG2028820.13742954882970118No Hit
GGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2019620.13680635315476045No Hit
CCGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA2011060.1362265102224243No Hit
GGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2010020.13615606201569186No Hit
CCGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1981480.13422280065016923No Hit
CCGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1980330.13414490119080164No Hit
GCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1977970.13398503795244723No Hit
GCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1958490.1326654888494206No Hit
GGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1953990.1323606648779822No Hit
CGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAAA1940700.1314604180823341No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1927270.13055068787424126No Hit
GCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1919420.13001893939073209No Hit
GCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1896070.12843724167226836No Hit
CGGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1869270.1266218455757019No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1858990.12592549214761595No Hit
CGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1851230.1253998401435355No Hit
CCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1833990.12423202563962484No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1830310.12398274736964854No Hit
GGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1822160.12343067728804345No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAAAAAAAAAAAAAAAGATCG1800810.12198445689021904No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1791670.12136532553489748No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1770610.11993874934856576No Hit
CCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAAA1766060.11963053844411138No Hit
GCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1744030.11813825575726963No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1741830.11798923070456639No Hit
CCGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCGAAGG1717300.11632760136692552No Hit
CCCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA1665360.1128092553499232No Hit
CCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1636070.1108251899891608No Hit
GCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1633430.11064635992591694No Hit
CCCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAA1600710.10842995096025816No Hit
CCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGA1575500.10672225933359993No Hit
CGCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA1542120.10446114285213019No Hit
GCCCCCCCGGCGCGGAGAGCCATTCGAAAAAAAAAAAAAAAGATCGGAAG1523670.10321136456923276No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1517350.10278325623601259No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGAAAAAAAAAAAAAAAGA1515060.1026281347038806No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1513590.10252855887321075No Hit
CGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAA1513090.10249468954305091No Hit
GGGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA1490940.1009942782169708No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1488930.10085812350972831No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)