FastQCFastQC Report
Thu 14 Sept 2023
SRR15348415.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15348415.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109637052
Total Bases16.4 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG11359451.0360958994045188No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA10072850.9187450607482587No Hit
CCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC9574110.8732549649364887No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA9415630.8587999976504292No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA8072570.7362994400834492No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6700340.6111382856226378No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6255200.5705370480045378No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6046660.5515161060696889No Hit
CCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG6035770.5505228287239974No Hit
CCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG5959730.543587217211933No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA5633790.5138582164722927No Hit
CCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC5417310.49411306681248596No Hit
CGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC5320860.4853158583651082No Hit
GCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG5149860.46971894136664677No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA5118560.4668640670856418No Hit
GCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC5109190.46600942900215886No Hit
CGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC5094200.464642190488668No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA4968900.4532135723605556No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA4471390.4078356648991255No Hit
GCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA4150270.37854629655675165No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3997250.36458933609415184No Hit
GGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC3845210.3507217614716601No Hit
GGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3812600.3477474020370413No Hit
CGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3756600.3426396397451475No Hit
GGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG3690400.3366015350358016No Hit
CGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG3656520.3335113388492058No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA3524650.3214834707522052No Hit
GCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC3501430.3193655736018878No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA3484460.3178177392073621No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA3480970.31749941616452804No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3429340.3127902417514838No Hit
GGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC3365330.30695188703176735No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA3326830.30344030045609033No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA3226510.2942901091503263No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA3150900.28739371795586044No Hit
CGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3008900.2744418921442725No Hit
CCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2834940.2585749934246681No Hit
CCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2831690.25827856079165645No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2827560.25790186332262927No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2763730.25207992641027965No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2755270.25130828946403994No Hit
CCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA2723640.24842331586952923No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2630780.23995355146907818No Hit
CGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG2627470.23965164623361088No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2607230.237805555005255No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA2573000.2346834353043349No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA2536300.2313360268023259No Hit
GCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2493480.22743041284984572No Hit
GGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2440710.22261725899014503No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA2419590.22069090292577367No Hit
GCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2394410.21839423409524No Hit
CGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2308130.21052463176408648No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2291930.20904702910107434No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2250520.2052700213063007No Hit
CGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2228020.20321779538545054No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2183810.19918539947608224No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2174230.1983116072840047No Hit
GGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2134150.19465590884366354No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2127910.1940867581882811No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2116580.19305334842458188No Hit
GGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2087440.19039548783197857No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2080750.1897852926581791No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2065470.1883916032328195No Hit
CCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAA2065050.1883532950156303No Hit
CGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2010230.18335316057202997No Hit
CGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1995450.18200507616713374No Hit
CGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1986670.1812042520077975No Hit
GGGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1982340.18080931253058502No Hit
CCGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA1979360.1805375066086235No Hit
CGCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1963940.1791310477775342No Hit
GCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG1949250.17779117227632132No Hit
GGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1935270.1765160559041664No Hit
CGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1888290.17223100818143122No Hit
GCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1813230.165384782509475No Hit
CCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1812720.16533826538860238No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1777160.16209483633324984No Hit
CCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1757390.16029161382412946No Hit
CGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAA1746660.15931293008498623No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1746160.1592673250645229No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1725060.15734279320097005No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1695860.15467946000591112No Hit
CCGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1694700.1545736563584362No Hit
CCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1691620.15429272943238204No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1675600.1528315445767367No Hit
GGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1671290.15243842930034274No Hit
CGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAAA1660730.15147525126815706No Hit
GCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1628430.14852916694622545No Hit
GGGGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAAAA1621840.14792809277651867No Hit
GGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1619620.14772560648566144No Hit
CCGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1592920.1452902983929192No Hit
CCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1571750.1433593818265015No Hit
CCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAAA1553370.14168294127426923No Hit
CCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGA1553330.14167929287263215No Hit
CGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1552360.14159081913293328No Hit
CGGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1531390.1396781445747009No Hit
GCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1528000.13936894253595947No Hit
GCGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG1522880.13890194712641488No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1513250.138023594432291No Hit
GGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1508390.13758031363338738No Hit
CGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG1487560.13568040848088472No Hit
CGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAA1475790.13460686629917776No Hit
CCGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG1470690.13414169509045173No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1457620.1329495798555401No Hit
CCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA1435740.13095390416006444No Hit
GGGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA1434860.13087363932404894No Hit
CCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1411330.1287274670610443No Hit
CCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAA1409340.1285459590796002No Hit
GCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1407720.128398198813299No Hit
CCCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA1398280.1275371760269512No Hit
CCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1395600.1272927331172677No Hit
CCCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAA1389930.12677557218521346No Hit
GCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAA1374800.12539556426599285No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA1370680.12501977889737495No Hit
GCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1352370.12334972304800752No Hit
GGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAA1344840.12266291143982967No Hit
CGCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAA1341110.12232269798717317No Hit
CCGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCGAAGG1320180.12041367183057786No Hit
GGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1263640.11525665611658364No Hit
CGCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA1230420.11222665855699951No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG1229750.11216554782957863No Hit
CGGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGA1206550.11004947488007977No Hit
CGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA1186490.10821980145909067No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAAAAAAAAAAAA1184780.10806383228910606No Hit
CGGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA1173100.10699849901108249No Hit
CCCCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA1157160.10554461095871129No Hit
CCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAA1150920.10497546030332884No Hit
CGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1146890.10460788383839434No Hit
GCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1140730.10404602998628602No Hit
GCGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1135470.10356626517101172No Hit
CCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAAA1134260.10345590102149044No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1127720.10285938735382998No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGGAAAAA1124320.10254927321467928No Hit
CCCCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCGGA1122890.10241884285615414No Hit
CCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAA1098700.10021247196613788No Hit
CGCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAA1096430.10000542517323431No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)