FastQCFastQC Report
Wed 28 Jun 2023
SRR1535540.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1535540.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34802880
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length49
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)