FastQCFastQC Report
Thu 14 Sept 2023
SRR15359333_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359333_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83097154
Total Bases4.2 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT1009602912.149668808151961No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA908340410.931065100015338No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA77197859.290071474650022No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG74284288.939449358277662No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA9846951.1849924487185204No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG8819171.061308309066758No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG7802250.9389310733794806No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA7584580.9127364337892968No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA6983590.8404126572132664No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6640170.7990851287157199No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA5713240.6875373854560651No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA4896670.5892704821154284No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG4298770.5173185594298452No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG4005670.48204659331654126No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3337300.40161423578959154No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG3259110.3922047679274311No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA3202650.3854103114048888No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA2514750.30262769288103414No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT2444880.29421946267858945No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAATAGATC2422700.2915502978597799No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA2131920.2565575230169736No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC2123350.25552620009104043No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA1989380.23940410763044906No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1988760.23932949617022983No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1966060.23659775399768804No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG1922850.2313978165846691No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG1883220.22662870018388356No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1811450.21799182195818642No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1751670.2107978331002768No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA1740510.20945482681633118No Hit
GGCGCCGGTGAAATACCACTACTCCTACTGTAGGCACCATCAATAGATCG1662810.20010432607595682No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA1644730.19792855962311295No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1602350.19282850529393583No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG1472390.17718898050347187No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGATC1396640.16807314483959343No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA1335600.160727526239948No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1277430.15372728649647857No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1271520.15301607080309873No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA1246850.15004725673276367No Hit
TGTTTTTTTACTTATTCAATTAAGCGCTGTAGGCACCATCAATAGATCGG1218290.14661031592008555No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG1197740.14413730703701355No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1174570.141349004563983No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1031020.12407404470194008No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC995420.1197899027925794No Hit
AACCCCGACTTCGGAAGGGGTGTATTTATTAGATTCTGTAGGCACCATCA970490.11678980004537821No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAG946710.11392808952277717No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCCTGTAGGCACCAT945740.11381135868985356No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG945030.11372591653379609No Hit
CGGCCCGAGTTGTAATTTGTAGAGGACTGTAGGCACCATCAATAGATCGG930750.11200744612745701No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT918030.11047670778231465No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG914870.11009643001732645No Hit
TGGCCGGAAAGCTATCCAAACTCGGTCATTCTGTAGGCACCATCAATAGA907400.10919748226274995No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCGTAGGCACCATCAATAGAT886420.106672726721784No Hit
TGTTTTTTTACTTATTCAATTAAGCGGCTGTAGGCACCATCAATAGATCG847530.10199266270900205No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)