FastQCFastQC Report
Thu 14 Sept 2023
SRR15359337_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359337_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55965048
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA49814498.901000138515025No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT38133856.81386889903141No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG35394296.324356230338621No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA31920065.703570557109145No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG11900772.1264647177645593No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT8176131.4609350464597117No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG7720111.3794520465702091No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG7267071.298501521878441No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA6086801.0876073938147968No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA5262950.9403994435955814No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG5232740.9350014316078135No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG4348560.7770135388787659No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA4193320.7492747973699585No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA3657500.653532897890126No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT3584510.640490829204685No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3415710.6103291468632351No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG3302050.5900200425093891No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA2976550.5318587415488324No Hit
AGTTGAACCTTGGGCTCGGCCCGTCTGTAGGCACCATCAATAGATCGGAA2584430.4617935823087295No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG2550580.45574516437473617No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2354020.4206232432785549No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG2311330.41299526804658504No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT2061800.3684085109692035No Hit
AGTTGAACCTTGGGCTCGGCCCGCTGTAGGCACCATCAATAGATCGGAAG1901980.3398514015390463No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA1881110.3361222883253848No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1830820.32713632265624076No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG1791790.3201623270295417No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG1746130.3120036634293604No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1731760.30943598940538747No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATC1493540.2668701365180639No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1484130.2651887299372994No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG1443250.25788417084891985No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1434260.2562778111081045No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA1427630.25509314313462217No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1409140.25178929534733896No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1340050.2394440901757111No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1321490.23612773458176967No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1279160.22856408521261343No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG1205490.21540051211963582No Hit
GTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCGG1199650.2143570036784387No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1131690.20221371024286444No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA1083440.19359225779633032No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1022520.18270689234466483No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC976320.17445173995026325No Hit
AGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCGGAAG948170.1694218148441506No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA939910.16794589365848486No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG913240.16318041932171665No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT903520.16144362102575163No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT879540.15715880383056224No Hit
AGTGAATCATCGAATCTTTGAACGCCTGTAGGCACCATCAATAGATCGGA819780.1464807106035181No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC727010.1299042931223788No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA726250.1297684940786614No Hit
TGCAAGGATGCTGGCGTAATGGTCATCCTGTAGGCACCATCAATAGATCG716460.1280191879760382No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC698450.12480110800583964No Hit
GTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCGG667900.11934234381430352No Hit
AGGGGTGTATTTATTAGATTAAAAACCCTGTAGGCACCATCAATAGATCG661030.11811479193227888No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCCTGTAGGCACCAT641710.11466263729462003No Hit
AGGGGTGTATTTATTAGATTAAAAACCACTGTAGGCACCATCAATAGATC626540.11195201690883926No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG615280.10994004686639418No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT607920.10862494033776224No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA563190.10063245188318252No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)