FastQCFastQC Report
Sat 16 Sept 2023
SRR15359343_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359343_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115815163
Total Bases5.9 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA1364252811.779569830592909No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT83563267.215226213514028No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG71868716.2054663774897945No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA67247705.806467672976465No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG26536712.2912984200523034No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG16711811.44297254065083No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA15432481.3325094573324565No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA12356481.0669138375257479No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA10817000.9339882377923174No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT10494480.9061404161733124No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT9905840.8553146015949569No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA9781180.8445508987454432No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG8984060.7757239870223211No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG8407870.7259731612172405No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA8085970.6981788731756998No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA7683950.6634666654140962No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG7227010.6240124188229135No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG6436770.5557795571206855No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC6429880.5551846436549936No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT5368630.46355156448728563No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA4239370.36604619724966414No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA3968840.34268742513447914No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT3889640.33584894233581486No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT3618780.31246167654230217No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG3552340.30672494930564487No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA3466880.2993459500635508No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG3412460.29464708347386254No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG3333460.2878258695711545No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC2970500.25648627718980116No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT2836820.2449437471326617No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT2677900.23122188240584698No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG2670500.23058293325546672No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA2643500.22825163230137663No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG2519110.21751124246140377No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT2485370.21459797971358896No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA2413250.20837081583177497No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA2208930.19072891172289763No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA2112640.1824148017647741No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG2080110.17960601583749444No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT2026970.17501767018192602No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG2022490.1746308469125066No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATC1976830.17068835796570092No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG1915320.16537730901436454No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG1910400.16495249417384147No Hit
NTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA1786030.15421383122346424No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGATC1784980.15412316951969407No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT1783180.15396774945608807No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA1722200.14870246307903567No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1707800.14745910257018763No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1630730.14080453351345712No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1547310.13360167701011652No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1534820.13252323445765044No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA1516520.13094313047765602No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC1516190.13091463679932824No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGA1496730.12923437322278775No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA1399680.1208546414600306No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1384420.11953702469857078No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1380850.11922877490575219No Hit
AATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1306630.11282028761639787No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT1254500.10831914988540835No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA1240940.10714831873957643No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGAT1220020.10534199222255551No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAATAGAT1206310.10415820940475644No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCCTGTAGGCACCAT1204950.10404078091225412No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)