FastQCFastQC Report
Sat 16 Sept 2023
SRR15359345_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359345_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89148581
Total Bases4.5 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA1346697315.106211281141984No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG60684936.807167239151007No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT60010456.731509276631111No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA59063556.625293340339315No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT35031073.9295151540325692No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA12230551.3719287354669167No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG10991621.232955126902132No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT7770820.8716706326486565No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA6706800.752317078384007No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG6675870.7488475896211966No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA6478360.7266924416890046No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA6277520.7041637600490803No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA6267260.7030128724090404No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATC6258000.7019741570536047No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG6156680.6906088611774986No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG4626270.5189392750962575No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG4606920.5167687413891646No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA4178770.4687421777358408No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA4113220.46138928448003No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG3945780.44260715714588883No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3718950.41716311782909926No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG3626320.4067725991062045No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA3547970.3979839006074589No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT3272540.36708828825890116No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3002170.3367602676704411No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG2142330.2403100504762942No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA2008030.22524531265393893No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2002070.22457676583769742No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1881960.21110375273387694No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG1830670.20535043625652324No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA1756130.19698911416211998No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1746260.19588197371307572No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG1616520.181328741508516No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA1477660.16575249806836523No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGATC1475350.16549338009092932No Hit
GGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCAA1447170.1623323651107806No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1443940.16197004863150877No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1406370.1577557358989259No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGACTGTAGGCACCATCAA1403670.1574528707304943No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1398850.15691220031870165No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT1393830.15634909544998815No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1383910.15523634638671366No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGATCTGTAGGCACCATCA1321290.14821211792479344No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT1287790.14445434639054994No Hit
CTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT1280880.14367923590393436No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1270090.14246889695305415No Hit
GGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATC1214590.1362433351575164No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCCTGTAGGCACCAT1194480.13398755051412428No Hit
TGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAGC1160170.13013891942935132No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCTCTGTAGGCACCATC1143370.12825442504799936No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1126890.12640582579772078No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG1057580.11863116475179789No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCTGTAGGCACCATC1051870.11799066100670744No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAATA1040000.1166591759884546No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAATAGATC1022760.11472532580187676No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1015750.11393899808680072No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1006470.11289803928567299No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1003690.11258620033447309No Hit
AGCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT988430.11087445127141171No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA979140.10983237074743792No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA970230.10883291569161375No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA949340.10648963666623028No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC934670.10484406925108546No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)