FastQCFastQC Report
Sat 16 Sept 2023
SRR15359346_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359346_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63000259
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA773204012.27302890929385No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA62621819.939928977117379No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG59917809.510722805123706No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT35515185.637306983134784No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT8730231.3857450966987295No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA8421101.3366770444546903No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA7473711.1862982975990624No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6372331.0114767940874656No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG5859240.9300342717638669No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG3927960.6234831510772043No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA3858000.6123784348251647No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT3685270.5849610872234668No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA3185670.5056598259381759No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG2417620.38374762872006607No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATC2324070.368898483417346No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA2260610.3588255089554473No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG2160420.3429223997317217No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA2031260.3224208967140913No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG1802900.28617342668384904No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1739210.27606394443553No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1672580.26548779743905493No Hit
NTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA1665060.26429415155261504No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1535480.24372598214239088No Hit
TCGAATCTTTGAACGCACATTGCGCTCGCCCTGTAGGCACCATCAATAGA1518550.2410386916028393No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG1442660.22899270937917893No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG1412560.22421495124329568No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1388230.22035306235804525No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA1286040.2041324941219686No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATA1211310.19227063812547182No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAATAGATC1184190.18796589391799168No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGATC1168710.18550876116239456No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA1124050.17841990141659578No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1116830.1772738743820085No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAG1068550.16961041382385428No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG1067310.16941358923619662No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1058270.1679786745003699No Hit
TCGAATCTTTGAACGCACATTGCGCTCGCCTGTAGGCACCATCAATAGAT1011530.16055965738172598No Hit
GGCGCCGGTGAAATACCACTACTCCTACTGTAGGCACCATCAATAGATCG984750.1563088812063455No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA937500.1488089120395521No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA915630.14533749773949342No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA911390.14466448463330922No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGAT901170.14304226908019535No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT894030.14190894040610214No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC885220.14051053345669579No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA851090.1350930954109252No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG838970.1331692937960779No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCTCTGTAGGCACCATC830010.1317470774207452No Hit
GGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCAA808550.12834074221821848No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC781100.12398361727370041No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC773530.1227820349119517No Hit
CATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCGGAAGAG766480.12166299189341429No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA738540.1172280894908702No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG737080.11699634441185393No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG731540.11611698294764154No Hit
AATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAGA682450.10832495148948515No Hit
NTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG659260.10464401424127479No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA657100.10430115850793567No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)