FastQCFastQC Report
Thu 14 Sept 2023
SRR15359347_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359347_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50961134
Total Bases2.5 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT573853111.26060303132187No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA561121411.010771463602048No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG33362906.5467342229864816No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA30368375.959123672561917No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG13761592.700408903773609No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG5830201.1440483251412734No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG5376011.0549235423214876No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG4868530.9553417708483489No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA4486620.8804003458792734No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG4216840.8274619634641569No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT4127870.8100035607527886No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA4096910.8039283427248695No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA3824120.7503993141125941No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA3420480.6711938553015715No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA3136440.6154572619989186No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA3054490.599376379654346No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG2928730.5746987498355118No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA2908630.5707545675887039No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG2739160.5374998130928562No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2729710.5356454587529391No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT2715840.5329237767746692No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT2211550.43396797253373526No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA2133180.4185895863306338No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1962670.38513075474340897No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1957340.3840848596501012No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1866530.3662653974693734No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1806360.35445836036537176No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1729450.33936646700208833No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG1518860.2980428182779449No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1351080.265119689055585No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1330430.2610675814239142No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1316310.2582968424525247No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGATC1288260.25279264782451666No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1220110.2394197115001405No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG1170290.22964363391128623No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCTCTGTAGGCACCA1155170.22667666696741876No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA1144710.22462412237529877No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1139180.22353898168749545No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1135870.2228894670985932No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT1074390.21082537135064536No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA865690.16987259349448544No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA854670.1677101612377778No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA852160.167217629026858No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT813020.15953726618406883No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG781230.153299178938993No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA774560.1519903383625647No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAATA762430.1496100930564065No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAATAGATC742220.14564432573262598No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGAT739200.14505171725574237No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT723870.14204354243765455No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT710860.13949061651571568No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC625170.12267584155407532No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG594460.11664968051927573No Hit
AGCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT594400.11663790684092706No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG586000.1149895918721118No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT546460.10723073784033141No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATC522680.10256443665480443No Hit
AATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC520170.10207190444388463No Hit
AGGGGTGTATTTATTAGATTAAAAACCCTGTAGGCACCATCAATAGATCG516490.10134978550516557No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA514300.10092004624543874No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG509710.10001935985176469No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)