FastQCFastQC Report
Sat 16 Sept 2023
SRR15359349_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359349_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130264207
Total Bases6.6 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT2542468419.517782041232554No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA90022256.910743332587133No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA57898924.444729779071238No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG51056363.9194465752207743No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA32893052.525102693789093No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA30175432.3164790002521567No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA24230511.8601049787989727No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT17764311.3637138250878078No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG15004771.1518720564583025No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA10184730.7818517637772899No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT9297960.7137770393059699No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG8918390.684638566908867No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA8836990.6783897283464828No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8032060.6165976199432895No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA7815570.5999783194473368No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA7171200.5505119299578586No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA6770720.5197682583673964No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG6453090.49538473757415186No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA5102590.3917108250618683No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG4992250.38324034782632194No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG4563310.3503118857507803No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC4425930.3397656272532331No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGATC4003300.30732156531686405No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG3308330.253970762666985No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG3295850.2530127097768307No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT3095290.23761630852287766No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG3081610.2365661351625163No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGAT2812110.21587741289516316No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA2672310.2051453781160315No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA2562860.19674322356255544No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA2503100.19215562414623996No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2337220.1794215044812732No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAATAG2298940.17648286148166548No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA2291660.17592399729574218No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT2248220.17258923627424377No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA2091630.1605682825827973No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1983140.15223982440548692No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT1941360.1490324967011084No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG1927560.1479731112937263No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1832790.14069789715911754No Hit
TGTTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA1706530.1310052883521565No Hit
ATGTACACGGAGTCGACCCAACGCGACTGTAGGCACCATCAATAGATCGG1700380.1305331709423449No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA1691620.12986069150983276No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGACTGTAGGCACCATCAA1662710.1276413558484258No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG1575670.12095955107606804No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC1549710.11896667823725361No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA1529220.11739372120846672No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1504960.11553135236911241No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1490690.11443588644423253No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCCTGTAGGCACCAT1456950.11184576589024182No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1420090.10901613211371257No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG1312040.10072145144214481No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)