FastQCFastQC Report
Sat 16 Sept 2023
SRR15359360_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359360_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73292432
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT2150037829.33505876841418No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA62751818.561840327525221No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG37982575.182331785633747No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA26544333.6217013511026623No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA15110722.0617026325446535No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA13512671.843665114018866No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG13102481.7876988991168967No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA11154561.5219252105046808No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG4609290.6288903061642162No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC4592660.6266213133710722No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG4476250.6107383638190639No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG4463400.6089851132242412No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA4006590.5466580778763078No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT3860370.526707859823781No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT3377560.4608333913657006No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG3177850.43358501188772125No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA3047090.4157441521383818No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA2888050.39404477668308235No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2062330.2813837586942128No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC1960680.26751465963088794No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA1758230.23989243527899307No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1593130.2173662350295594No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1529220.208646371565348No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1477330.20156651371590453No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAATAGA1390110.1896662400287113No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG1378840.18812856421519755No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGTTGTAGGCACCATCAATAGAT1359430.1854802689587378No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA1353550.18467800331690454No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1246340.17005029932694826No Hit
ACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCGGAAGAGC1229810.16779495050730475No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCGTAGGCACCATCAATAGAT1184870.1616633488161506No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG1175820.16042856921434945No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1168150.15938207644685606No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA1161490.1584733878117184No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1153320.15735867517672222No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG1071560.14620336244265983No Hit
TGTTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA1070870.14610921902550594No Hit
TACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCGGAAGAG1026180.1400117272681032No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG988940.1349307115364926No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA909520.12409466778234347No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGAGGCACCATCAATAGATC897050.12239326428682296No Hit
TTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC894660.12206717332015946No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG872570.11905321957388453No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT824880.11254640861146482No Hit
TTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCG810780.11062260834788509No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG809790.11048753301022948No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA796950.10873564681275687No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG773550.10554295701362454No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA765140.10439549884222697No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC764480.10430544861712325No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGCTGTAGGCACCATCAATAGATC751910.10259040114810217No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)