FastQCFastQC Report
Sat 16 Sept 2023
SRR15359361_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359361_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102932708
Total Bases5.2 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT1714634916.657823672529823No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA88206998.569383990169579No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG44354784.30910454624394No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA38445913.735052807509932No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA35797393.477746840197773No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG17496711.6998202359545422No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG14636531.421951319885609No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG11360811.1037123399104587No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA10310951.0017175492944381No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT9019300.8762326548330973No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA7681800.7462933939326651No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6875260.6679373479613496No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA6435950.6252580083679524No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA5888130.5720368301201209No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA5859930.5692971761706687No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA5578710.5419764143385793No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG4786750.4650368277496401No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC3991700.38779704503645235No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG3920650.38089447719572284No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA3463890.3365198552825405No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC3409430.33122902003122273No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG3394540.3297824438855723No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG3367570.32716228548072396No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC3236530.3144316381922061No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG2980290.2895377045749151No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT2908820.2825943333774916No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG2732860.2654996699397047No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA2712140.2634867043428023No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT2662870.2587000819992028No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG2582020.2508454358356141No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG2557260.24843998080765545No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG2552870.2480134885793542No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT2327320.22610111452620094No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG2182060.21198898216104448No Hit
AGTTGAACCTTGGGCTCGGCCCGTCTGTAGGCACCATCAATAGATCGGAA2175910.21139150443802565No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG2117890.20575481216330185No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA2091140.20315602694529322No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA2083640.20242739557575806No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC2074170.2015073770331584No Hit
TTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1869170.1815914529325314No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1801320.17499976780947024No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT1653080.16059812591348513No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1627170.15808094740886444No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG1621060.15748735571981648No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1590740.1545417419699091No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1550270.15061004709989753No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA1491390.14488980509480037No Hit
GTCTAGTGGTATGATTTCTGCTGTAGGCACCATCAATAGATCGGAAGAGC1400630.13607239401493254No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1400450.1360549068620637No Hit
GTTTAGTGGTAAAATCCACTGTAGGCACCATCAATAGATCGGAAGAGCAC1315460.12779805618249157No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC1307420.12701696335434992No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1294170.1257297146015045No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAATAG1280380.12439000439005259No Hit
GTCTAGTGGTATGATTTCCCTGTAGGCACCATCAATAGATCGGAAGAGCA1279500.1243045116426938No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT1249940.12143273253823264No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGA1171750.1138365076337057No Hit
GTCTAGTGGTATGATTCTCGCCTGTAGGCACCATCAATAGATCGGAAGAG1151160.11183617164720859No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA1125820.10937436912667253No Hit
TGCAAGGATGCTGGCGTAATGGTCATCCTGTAGGCACCATCAATAGATCG1096950.10656962410820865No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA1095850.10646275817401014No Hit
TCGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAA1074230.10436235681276354No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTGCCTGTAGGCACCATCAATAGA1046550.10167322130493253No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA1032980.1003548842803203No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)