FastQCFastQC Report
Sat 16 Sept 2023
SRR15359366_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359366_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68611207
Total Bases3.4 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT1112154816.209520989770667No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA726499810.58864625424823No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG41154135.9981644106625325No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA31699494.620162125992041No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG16195342.3604511140577955No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA12974951.8910831870367768No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG8737741.2735149813061881No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA6464540.9421988451536788No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT6091820.8878753583215641No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT5087940.7415610688790244No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA4970200.7244006070320261No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA4330950.6312306967577469No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG4245490.6187750056634334No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA3793720.5529300774434708No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG3226880.470313836630217No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA3050760.444644560763958No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC2937690.42816474573898694No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA2798110.4078211304459343No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC2370490.3454960353634356No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG2176850.31727324079869346No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA2172440.3166304886605478No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG2069560.30163585374616714No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG2042090.297632134645292No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG2031270.2960551328006808No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1870580.27263476067401055No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1860820.271212252540609No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA1806940.26335930805006824No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1665090.2426848430169724No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA1610520.23473133186536127No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1544890.22516583916094057No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1503630.21915224432649902No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1366760.19920360823851999No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG1365280.1989879000379632No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAATAG1296450.18895601122423047No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1278150.18628880847410248No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT1224580.17848104610665136No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGACTGTAGGCACCATCAA1179230.1718713387449954No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA1154940.16833110077774904No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1080640.1575019661146611No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA1072140.15626310144930114No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG999720.14570797450043402No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG939360.1369105778885365No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGTTGTAGGCACCATCAATAGAT930950.1356848306137509No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA899450.13109374391271092No Hit
GTCTAGTGGTATGATTCTCGCCTGTAGGCACCATCAATAGATCGGAAGAG895950.13058362316815095No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC894400.13035771255270295No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAGA890420.12977763239174614No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT890040.12972224785376535No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT842250.122756913458759No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG820110.11953003537745663No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG759980.1107661609859159No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCGTAGGCACCATCAATAGAT734460.10704665201415273No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA729370.10630479070277833No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)