FastQCFastQC Report
Sat 16 Sept 2023
SRR15359369_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359369_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74722997
Total Bases3.8 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT2056163527.517144420746398No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA58067717.771062769337263No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG30233104.046023475209378No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA27381113.6643484736031127No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA23957383.2061588750247796No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA11664191.5609906545905807No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG8996301.2039533157375901No Hit
ACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCGGAAGAGC8307281.1117434168225346No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT5315630.7113780513915949No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC5219480.6985105268194743No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG4591740.6145015837627604No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT4581820.6131740138849089No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG4436270.5936954054452607No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA4416380.5910335743091246No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG4212250.5637153445545018No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG3460660.46313185216594027No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA3213390.43004029937396654No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG2794010.3739156768564837No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA2757810.3690711174231944No Hit
CTGTGTTCAGGTCGCAGTCCTGTAGGCACCATCAATAGATCGGAAGAGCA2631930.35222489804577833No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG2403030.3215917584247859No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA2283440.305587314705806No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA2122100.28399556832550493No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA2078500.27816068458817306No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2006650.26854517090635427No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGG1817020.2431674414772202No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG1626050.2176103830524892No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC1553180.20785836520984297No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1541950.20635548116465402No Hit
ACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGATCGGAAGAG1467950.19645223812422835No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG1467330.1963692650068626No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1317970.17638077337824126No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1288890.17248906651857124No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1282860.1716820860383852No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA1245920.1667384941746916No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1241650.16616705028573733No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG1240590.16602519302056368No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1152920.1542925265698323No Hit
TTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCG1147270.15353640058093496No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1119150.14977316822557318No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1046320.14002650348727314No Hit
ATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGATCGGAAGAGCACA1045490.13991542657209No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1037560.1388541736354606No Hit
TGTTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA1011210.13532781614741712No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGATCG998600.1336402500022851No Hit
TTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC983830.13166361622245962No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG976020.13061842259886874No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGACTGTAGGCACCATCAA968890.12966423174916283No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG967900.12953174241659499No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGTTGTAGGCACCATCAATAGAT958900.12832729393870537No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC924120.1236727697097053No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGCTGTAGGCACCATCAATAGATC884390.11835579881786594No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA832340.11139007178740436No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA821080.1098831729139558No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT816960.10933180316629967No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAATAGATCGGAAGAGCA816340.10924883004893393No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA815990.10920199038590489No Hit
TTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCGG784990.10505333451761845No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT774390.10363476186588179No Hit
AGGGGTGTATTTATTAGATTAAAAACCCTGTAGGCACCATCAATAGATCG764800.10235135509888608No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)